RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZNF888P0CJ79 500 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 ITGAMP11215 1152 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 COL6A2P12110 1019 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 GP1BBP13224 206 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TFEBP19484 476 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 HNF4AP41235 474 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PIK3CBP42338 1070 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SERPINB8P50452 374 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 EFNA3P52797 238 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ALDH18A1P54886 795 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 RAB38P57729 211 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 FOXL2P58012 376 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TAS2R50P59544 299 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MAT1AQ00266 395 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 EEF1A2Q05639 463 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 SRSF1Q07955 248 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMG1-201ENST00000330588 IFT88Q13099 833 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ZNF460Q14592 562 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ABRAXAS2Q15018 415 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 EFTUD2Q15029 972 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMG1-201ENST00000330588 OR4D1Q15615 310 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 HIST2H2ACQ16777 129 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 MEP1AQ16819 746 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SYT16Q17RD7 645 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 BTBD16Q32M84 506 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 DEFB134Q4QY38 66 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 LIPJQ5W064 366 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 HIST2H2AA3Q6FI13 130 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 KLC3Q6P597 504 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TRIM40Q6P9F5 258 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 FAM180AQ6UWF9 173 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 LCNL1Q6ZST4 164 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TAOK1Q7L7X3 1001 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TMEM151BQ8IW70 566 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMG1-201ENST00000330588 ZNF595Q8IYB9 648 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SLC5A8Q8N695 610 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 HORMAD2Q8N7B1 307 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PPM1NQ8N819 430 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 BCORP1Q8N888 145 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SUN3Q8TAQ9 357 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ZCCHC10Q8TBK6 192 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 BRIX1Q8TDN6 353 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 ELP5Q8TE02 316 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SSC4DQ8WTU2 575 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 FAR1Q8WVX9 515 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SLC44A1Q8WWI5 657 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 C8orf44Q96CB5 159 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MS4A6EQ96DS6 147 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MAGEB10Q96LZ2 347 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 TSNARE1Q96NA8 513 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 QRFPRQ96P65 431 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SERINC2Q96SA4 455 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 LRRC1Q9BTT6 524 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 KRTAP4-11Q9BYQ6 195 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 BRINP2Q9C0B6 783 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SPNS1Q9H2V7 528 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PIF1Q9H611 641 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 LYRM4Q9HD34 91 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ASF1BQ9NVP2 202 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CD274Q9NZQ7 290 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 HCN3Q9P1Z3 774 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SUCOQ9UBS9 1254 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 FETUBQ9UGM5 382 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TNPO3Q9Y5L0 923 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 DOCK10Q96BY6 2186 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 FASNP49327 2511 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 LOC400499M0QZD8 3231 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CTAGE15A4D2H0 777 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ANKUB1A6NFN9 424 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TCP11X1B4DZS4 312 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 K7EPI3 171 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PSMD12O00232 456 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 E2F3O00716 465 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SHOXO15266 292 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PHGDHO43175 533 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 B3GALT2O43825 422 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PRAMEF2O60811 474 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 URI1O94763 535 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 KLHL2O95198 593 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ABHD2P08910 425 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 RBP1P09455 135 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CTAGE8P0CG41 777 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MTHFD2P13995 350 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SAT1P21673 171 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 GNLYP22749 145 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TRHRP34981 398 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 GLRBP48167 497 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 KCNC1P48547 511 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MTTPP55157 894 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PER3P56645 1201 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 OR4D2P58180 307 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SLC26A5P58743 744 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ARG2P78540 354 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 RAPSNQ13702 412 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SLMAPQ14BN4 828 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 RBBP5Q15291 538 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 PCBP2Q15366 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMG1-201ENST00000330588 NSDHLQ15738 373 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms