RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SF3B4Q15427 424 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 KCTD19Q17RG1 926 aaPredicted RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 BBS9Q3SYG4 887 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 ZNF470Q6ECI4 717 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 QSOX2Q6ZRP7 698 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 BTLAQ7Z6A9 289 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 MEX3DQ86XN8 651 aaKnown RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 CILP2Q8IUL8 1156 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 GOLM1Q8NBJ4 401 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 LRRC39Q96DD0 335 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 VMP1Q96GC9 406 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 SCYL1Q96KG9 808 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 SIGLEC10Q96LC7 697 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 WFIKKN1Q96NZ8 548 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 RASL10BQ96S79 203 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 KCNK17Q96T54 332 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 EBNA1BP2Q99848 306 aaKnown RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 CCDC77Q9BR77 488 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 P2RY12Q9H244 342 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 LIN28AQ9H9Z2 209 aaKnown RBP13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 ACKR4Q9NPB9 350 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 PSD3Q9NYI0 1048 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 ATG4BQ9Y4P1 393 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 COMMD10Q9Y6G5 202 aa13.56□□□□□ -0.24
CTHRC1-201ENST00000330295 IGKV3D-11A0A0A0MRZ8 115 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 P04436 131 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 RFPL3SP0C7P2 107 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 TMIGD3P0DMS9 266 aaPredicted RBP13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 MAOAP21397 527 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 LOXP28300 417 aaPredicted RBP13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 IDUAP35475 653 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 OCRLQ01968 901 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 CRYZQ08257 329 aaKnown RBP13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 SPANXN3Q5MJ09 141 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 LIPNQ5VXI9 398 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 PM20D2Q8IYS1 436 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 KRT222Q8N1A0 295 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 KCT2Q8NC54 265 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 SPATA4Q8NEY3 305 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 SGMS2Q8NHU3 365 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 LPGAT1Q92604 370 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 TRIB1Q96RU8 372 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 TRIM31Q9BZY9 425 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 KLHL28Q9NXS3 571 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 MYOTQ9UBF9 498 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 CRYL1Q9Y2S2 319 aa13.55□□□□□ -0.24
CTHRC1-201ENST00000330295 FREM1Q5H8C1 2179 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 KCNE1BA0A087WTH5 132 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 ZCWPW2A0A1B0GU75 182 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 ZFAND5O76080 213 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 MYO1DO94832 1006 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 CCL3P10147 92 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 SRD5A1P18405 259 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 TRPC1P48995 793 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 ABATP80404 500 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 FOXF2Q12947 444 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 TERF2Q15554 542 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 HIST2H2BDQ6DRA6 164 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 UGT3A1Q6NUS8 523 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 CAMKVQ8NCB2 501 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 OR9A1PQ8NGU1 263 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 SLC22A8Q8TCC7 542 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 NCLNQ969V3 563 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 ZMYND19Q96E35 227 aaPredicted RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 MARK4Q96L34 752 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 SGCZQ96LD1 299 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 TIMP4Q99727 224 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 SFXN3Q9BWM7 321 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 PRDM14Q9GZV8 571 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 PPANQ9NQ55 473 aaKnown RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 FBXO5Q9UKT4 447 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 PPIEQ9UNP9 301 aaKnown RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 SLC22A7Q9Y694 548 aa13.54□□□□□ -0.24
CTHRC1-201ENST00000330295 H7BY64 318 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 WWP2O00308 870 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 CHST10O43529 356 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 GPRIN2O60269 458 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 IVDP26440 423 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 ATP5DP30049 168 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 CPOXP36551 454 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 CRYMQ14894 314 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 ARHGAP19Q14CB8 494 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 CENPUQ71F23 418 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 PPM1NQ8N819 430 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 C9orf106Q8NAJ2 232 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 FBXO15Q8NCQ5 510 aaPredicted RBP13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 TM4SF19Q96DZ7 209 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 C16orf45Q96MC5 204 aaPredicted RBP13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 PRAP1Q96NZ9 151 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
CTHRC1-201ENST00000330295 ERP44Q9BS26 406 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms