RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 BTG2P78543 158 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 STX5Q13190 355 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 VWA2Q5GFL6 755 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 FAM69BQ5VUD6 431 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 SLC48A1Q6P1K1 146 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 SHISA6Q6ZSJ9 500 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 ZNF551Q7Z340 670 aaPredicted RBP14.4□□□□□ -0.1
PRPF3-201ENST00000324862 YTHDF3Q7Z739 585 aaKnown RBP14.4□□□□□ -0.1
PRPF3-201ENST00000324862 OR51Q1Q8NH59 317 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 COL26A1Q96A83 441 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 RTKNQ9BST9 563 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 ROGDIQ9GZN7 287 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 EFCAB1Q9HAE3 211 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 LYARQ9NX58 379 aaKnown RBP14.4□□□□□ -0.1
PRPF3-201ENST00000324862 SLC39A1Q9NY26 324 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 LAMA5O15230 3695 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 FER1L5A0AVI2 2057 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 A0A1B0GX78 115 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 C6orf47O95873 294 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 XCR1P46094 333 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 AVPR1BP47901 424 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 TRA2BP62995 288 aaKnown RBP14.4□□□□□ -0.1
PRPF3-201ENST00000324862 ACTN3Q08043 901 aaPredicted RBP14.4□□□□□ -0.1
PRPF3-201ENST00000324862 NFYCQ13952 458 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 C3orf38Q5JPI3 329 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 DLEU7Q6UYE1 221 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 FAM9CQ8IZT9 166 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 RNF148Q8N7C7 305 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 AMER2Q8N7J2 671 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 DNAJB14Q8TBM8 379 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 KLHL29Q96CT2 875 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 MRGBPQ9NV56 204 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 VAPAQ9P0L0 249 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 CTSFQ9UBX1 484 aa14.4□□□□□ -0.1
PRPF3-201ENST00000324862 SPTBN2O15020 2390 aa14.4□□□□□ -0.11
PRPF3-201ENST00000324862 C1orf226A1L170 272 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 TGFBR3LH3BV60 316 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 FGF17O60258 216 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 FGF5P12034 268 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 BUD31P41223 144 aaPredicted RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 KCNJ2P63252 427 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 HBA1P69905 142 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 MC2RQ01718 297 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 SRSF11Q05519 484 aaKnown RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 TARDBPQ13148 414 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 ART3Q13508 389 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 RHBDD2Q6NTF9 364 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 FAM199XQ6PEV8 388 aaPredicted RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 CAMKMTQ7Z624 323 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 MSRB3Q8IXL7 192 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 DEFB107AQ8IZN7 70 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 NETO1Q8TDF5 533 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 GBP5Q96PP8 586 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 FAIM2Q9BWQ8 316 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 ANKRA2Q9H9E1 313 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 LYRM4Q9HD34 91 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 ENAMQ9NRM1 1142 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 SLC25A37Q9NYZ2 338 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 TRPC4Q9UBN4 977 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 LEF1Q9UJU2 399 aaPredicted RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 NUP214P35658 2090 aaPredicted RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 DSCR3O14972 297 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 NME6O75414 186 aaPredicted RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 DKK1O94907 266 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 CASP9P55211 416 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 IRX1P78414 480 aaPredicted RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 FOLH1Q04609 750 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 HSPB3Q12988 150 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 SELPLGQ14242 412 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 ASRGL1Q7L266 308 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 LAPTM4BQ86VI4 370 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 CCDC116Q8IYX3 515 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 PRPF18Q99633 342 aaKnown RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 MESP1Q9BRJ9 268 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 IKZF5Q9H5V7 419 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 ZNF304Q9HCX3 659 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 PHF11Q9UIL8 331 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 SATB2Q9UPW6 733 aa14.39□□□□□ -0.11
PRPF3-201ENST00000324862 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.39□□□□□ -0.11
PRPF3-201ENST00000324862 CFAP47Q6ZTR5 3102 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 CROCCQ5TZA2 2017 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 H0YIG0 161 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 GYG2O15488 501 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 DRD2P14416 443 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 MAOAP21397 527 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 PTPN4P29074 926 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 PTPN6P29350 595 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 RAB38P57729 211 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 RABL3Q5HYI8 236 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 COX15Q7KZN9 410 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 R3HCC1LQ7Z5L2 792 aaKnown RBP14.38□□□□□ -0.11
PRPF3-201ENST00000324862 DHDDSQ86SQ9 333 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 OR5AK3PQ8NH89 298 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 SUN3Q8TAQ9 357 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 LRRC58Q96CX6 371 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 PANX1Q96RD7 426 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 BTBD10Q9BSF8 475 aa14.38□□□□□ -0.11
PRPF3-201ENST00000324862 CADM1Q9BY67 442 aaKnown RBP14.38□□□□□ -0.11
PRPF3-201ENST00000324862 WDR41Q9HAD4 459 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms