RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SLC6A17Q9H1V8 727 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CNTN3Q9P232 1028 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 B3GNT3Q9Y2A9 372 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 RNF215Q9Y6U7 377 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 PXDNQ92626 1479 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 RPS10-NUDT3A0A1W2PQS6 291 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CDK14O94921 469 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 H2AFB2P0C5Z0 115 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 PABPC4LP0CB38 370 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ETV6P41212 452 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 RPS10P46783 165 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ERVK-21P61565 698 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 DBPQ10586 325 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 FAM174BQ3ZCQ3 159 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 GPR149Q86SP6 731 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ZDHHC21Q8IVQ6 265 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 MCATQ8IVS2 390 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 LCN9Q8WX39 176 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TFGQ92734 400 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CIB1Q99828 191 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CRB3Q9BUF7 120 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ACOD1A6NK06 481 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF587BE7ETH6 402 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CORO1AP31146 461 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 MIA3Q5JRA6 1907 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CRHP06850 196 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF30P17039 623 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SOX10P56693 466 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TLDC1Q6P9B6 456 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 KCT2Q8NC54 265 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TNFRSF25Q93038 417 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 MAPKAP1Q9BPZ7 522 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 EI24O14681 340 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 BANF1O75531 89 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 DBIP07108 87 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 S100A7P31151 101 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF84P51523 738 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CDH15P55291 814 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SCARB2Q14108 478 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TAF9Q16594 264 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 IGSF11Q5DX21 431 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ELP2Q6IA86 826 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TMEM200AQ86VY9 491 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 KDM8Q8N371 416 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SMARCD2Q92925 531 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SLC35G5Q96KT7 338 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 POLR2J3Q9H1A7 115 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF586Q9NXT0 402 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 RPP14O95059 124 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF41P51814 821 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CAP1Q01518 475 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CMPK2Q5EBM0 449 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 ATAT1Q5SQI0 421 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 OR1E3Q8WZA6 343 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CLIP3Q96DZ5 547 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SLC22A11Q9NSA0 550 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 FBXL4Q9UKA2 621 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 PLSCR1O15162 318 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 PRKYO43930 277 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 DUSP11O75319 330 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TSTD2Q5T7W7 516 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 PIGWQ7Z7B1 504 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 OR56A1Q8NGH5 318 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 OSBPL2Q9H1P3 480 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 MAFBQ9Y5Q3 323 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SNX10Q9Y5X0 201 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 FAM221BA6H8Z2 402 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 DUSP6Q16828 381 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 MUL1Q969V5 352 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 NDC1Q9BTX1 674 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SCPEP1Q9HB40 452 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 TACR2P21452 398 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 RBMXP38159 391 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 POLR2HP52434 150 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SCGB2B2Q4G0G5 96 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 SPPL2CQ8IUH8 684 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 OR7G3Q8NG95 312 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 OR10H4Q8NGA5 316 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 CNOT9Q92600 299 aaKnown RBP9.38□□□□□ -0.91
COL12A1-201ENST00000322507 RSC1A1Q92681 617 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 WACQ9BTA9 647 aa9.38□□□□□ -0.91
COL12A1-201ENST00000322507 HLA-DPB1P04440 258 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 TAF10Q12962 218 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 GRIK2Q13002 908 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 TRAM2Q15035 370 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 IQCJQ1A5X6 159 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 COQ5Q5HYK3 327 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 DBX2Q6ZNG2 339 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 AMZ2Q86W34 360 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 XAGE5Q8WWM1 108 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 K7EPI3 171 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 ADAMTS3O15072 1205 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-201ENST00000322507 H3F3AP84243 136 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 PXKQ7Z7A4 578 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 ZNF439Q8NDP4 499 aa9.37□□□□□ -0.91
COL12A1-201ENST00000322507 BRINP2Q9C0B6 783 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms