RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 A0A0A6YYD5 115 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 TCRBV21S2A2A0A5A6 115 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PRAMEF25A6NGN4 478 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 C4orf51C9J302 202 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 TNFRSF11BO00300 401 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 XPNPEP2O43895 674 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PRAMEF10O60809 474 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 B4GALT2O60909 372 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 UGT2B11O75310 529 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 JRKO75564 520 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ERAL1O75616 437 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 IFNA14P01570 189 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 BCHEP06276 602 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ARAFP10398 606 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 HNRNPA2B1P22626 353 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 RYKP34925 604 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 PTGER1P34995 402 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 RAB8AP61006 207 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ABATP80404 500 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 MRPS21P82921 87 aaKnown RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 SLAMF1Q13291 335 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 COL9A2Q14055 689 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 NFATC4Q14934 902 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 DUSP7Q16829 419 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 CRB2Q5IJ48 1285 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 RPS26P11Q5JNZ5 115 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 SLC44A3Q8N4M1 653 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 SLC38A5Q8WUX1 472 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 HMGB4Q8WW32 186 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ISOC1Q96CN7 298 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 MS4A6EQ96DS6 147 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 NEURL3Q96EH8 262 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 MAGED4Q96JG8 741 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 WDR92Q96MX6 357 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 NECTIN4Q96NY8 510 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 CDX2Q99626 313 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 SYNPO2LQ9H987 977 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 CAPN10Q9HC96 672 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ZNF624Q9P2J8 865 aaPredicted RBP7.19□□□□□ -1.26
IFT88-201ENST00000319980 CD207Q9UJ71 328 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ADAM29Q9UKF5 820 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 BLOC1S6Q9UL45 172 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 ANGPT4Q9Y264 503 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 GMPPBQ9Y5P6 360 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 HEBP2Q9Y5Z4 205 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 AP1M2Q9Y6Q5 423 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 KNL1Q8NG31 2342 aa7.19□□□□□ -1.26
IFT88-201ENST00000319980 C2CD4DB7Z1M9 353 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 C5orf58C9J3I9 102 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 J3KTA2 159 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 SLC1A7O00341 560 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ADAMDEC1O15204 470 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 KDM1AO60341 852 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ITGAMP11215 1152 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 DDX5P17844 614 aaKnown RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 CMPK1P30085 196 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 GPC1P35052 558 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 CCT3P49368 545 aaKnown RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 CLK3P49761 638 aaKnown RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 CDH12P55289 794 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 SH3BGRP55822 239 aaPredicted RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 PCBP3P57721 371 aaKnown RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 KIAA1024LP59773 190 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 HYAL2Q12891 473 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 CDK5R2Q13319 367 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 TMEM35AQ53FP2 167 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 SAXO2Q658L1 398 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 REEP3Q6NUK4 255 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 CCDC80Q76M96 950 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 NATD1Q8N6N6 113 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ACOT4Q8N9L9 421 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ZNF300Q96RE9 604 aaPredicted RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 FEVQ99581 238 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 EPYCQ99645 322 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 CCDC90BQ9GZT6 254 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 KIR3DX1Q9H7L2 352 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 FANCEQ9HB96 536 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 RASSF1Q9NS23 344 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 SIRT3Q9NTG7 399 aaPredicted RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 OR6C2Q9NZP2 312 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 FBXW2Q9UKT8 454 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ATG4BQ9Y4P1 393 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 LYVE1Q9Y5Y7 322 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 LRRC72A6NJI9 287 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 BTN3A3O00478 584 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 PGRMC2O15173 223 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 TBX19O60806 448 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ANGPTL1O95841 491 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ASGR2P07307 311 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 CHRM5P08912 532 aaPredicted RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 ALPPL2P10696 532 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 HIST1H1TP22492 207 aaPredicted RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 FMO3P31513 532 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 SLC19A1P41440 591 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 GSSP48637 474 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 PRKAG1P54619 331 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 SPIBQ01892 262 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 IL18R1Q13478 541 aa7.18□□□□□ -1.26
IFT88-201ENST00000319980 ELOAQ14241 798 aaKnown RBP7.18□□□□□ -1.26
IFT88-201ENST00000319980 ZIC1Q15915 447 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms