RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 CDH4P55283 916 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 LARS2Q15031 903 aaKnown RBP13.57□□□□□ -0.24
PABPC1-201ENST00000318607 LCN1P1Q5VSP4 162 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 RRM2BQ7LG56 351 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 WDR48Q8TAF3 677 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 RNF31Q96EP0 1072 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 SNX18Q96RF0 628 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ABCG4Q9H172 646 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 TMEM245Q9H330 911 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 ING3Q9NXR8 418 aa13.57□□□□□ -0.24
PABPC1-201ENST00000318607 PRAMEF25A6NGN4 478 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SERPINI2O75830 405 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 HBQ1P09105 142 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 CD22P20273 847 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 ALAS2P22557 587 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 AOAHP28039 575 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SRP9P49458 86 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 FAPQ12884 760 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 RPA4Q13156 261 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SORCS1Q8WY21 1168 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 KLHL6Q8WZ60 621 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 RIT1Q92963 219 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 P2RY12Q9H244 342 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SLAMF7Q9NQ25 335 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SATB2Q9UPW6 733 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 TRBV5-3A0A0A0MS03 114 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 HMX3A6NHT5 357 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 FAM183AA6NL82 134 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SLC38A8A6NNN8 435 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SGTAO43765 313 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 OR56A5P0C7T3 313 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 ITGA2P17301 1181 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 ACRV1P26436 265 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SRSF11Q05519 484 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SAXO2Q658L1 398 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SIGIRRQ6IA17 410 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 TRMT11Q7Z4G4 463 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 TRIM46Q7Z4K8 759 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 THOC6Q86W42 341 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 MAGEB10Q96LZ2 347 aaPredicted RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 PARK7Q99497 189 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 WFDC6Q9BQY6 131 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 ANKRA2Q9H9E1 313 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 C12orf4Q9NQ89 552 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 PCDHGA2Q9Y5H1 932 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 A0A1B0GVM2 712 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 CPSF4LA6NMK7 179 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SPAM1P38567 509 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 MAP2K3P46734 347 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 EIF4EBP2Q13542 120 aaPredicted RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 GPR19Q15760 415 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 MARCH9Q86YJ5 346 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 OR5D16Q8NGK9 328 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 CMTM7Q96FZ5 175 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 NANSQ9NR45 359 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 KCTD5Q9NXV2 234 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 PPIEQ9UNP9 301 aaKnown RBP13.56□□□□□ -0.24
PABPC1-201ENST00000318607 CLCA2Q9UQC9 943 aa13.56□□□□□ -0.24
PABPC1-201ENST00000318607 TEX28O15482 410 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 FABP7O15540 132 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 ERAL1O75616 437 aaKnown RBP13.55□□□□□ -0.24
PABPC1-201ENST00000318607 STC2O76061 302 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 ELNP15502 786 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 CPN2P22792 545 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 PDHA2P29803 388 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 WNT3P56703 355 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF91Q05481 1191 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 GINS1Q14691 196 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 DCST1Q5T197 706 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 SYT9Q86SS6 491 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 CSGALNACT1Q8TDX6 532 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 TRPM5Q9NZQ8 1165 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 INMT-MINDY4F8WBC2 141 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 SLC28A2O43868 658 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 ACVR2AP27037 513 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 ZNF81P51508 661 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 MAP2K5Q13163 448 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 GRB14Q14449 540 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 CLLU1OSQ5K130 101 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 SLC35F1Q5T1Q4 408 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 ARTNQ5T4W7 220 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 UNC5DQ6UXZ4 953 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 TECPR1Q7Z6L1 1165 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 GALNT7Q86SF2 657 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 LRRTM4Q86VH4 590 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 IZUMO1Q8IYV9 350 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 VWA5B2Q8N398 1253 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 KLK6Q92876 244 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 TMEM159Q96B96 161 aa13.55□□□□□ -0.24
PABPC1-201ENST00000318607 SLC29A3Q9BZD2 475 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms