RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CERS1P27544 350 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 ITGA1P56199 1179 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 POU6F2P78424 691 aaPredicted RBP13.04□□□□□ -0.32
DDX54-202ENST00000314045 TCTE1Q5JU00 501 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
DDX54-202ENST00000314045 RNF31Q96EP0 1072 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 JSRP1Q96MG2 331 aaPredicted RBP13.04□□□□□ -0.32
DDX54-202ENST00000314045 FAM129BQ96TA1 746 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 IFT27Q9BW83 186 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 SLITRK2Q9H156 845 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 POFUT2Q9Y2G5 429 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 SLC5A10A0PJK1 596 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 H0YIV9 168 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 H3BNX3 289 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 ARNTLO00327 626 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 SCDO00767 359 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 TAPBPO15533 448 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 LINGO3P0C6S8 592 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 BLVRAP53004 296 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 DPTQ07507 201 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 MYBPC3Q14896 1274 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 TMEM196Q5HYL7 178 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 CARM1Q86X55 608 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 PDSS2Q86YH6 399 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 L3MBTL4Q8NA19 623 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 KBTBD8Q8NFY9 601 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 PHOSPHO1Q8TCT1 267 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 MAL2Q969L2 176 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 MCHR1Q99705 422 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 SH3GL3Q99963 347 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 COPS4Q9BT78 406 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 TAPBPLQ9BX59 468 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 OR51V1Q9H2C8 321 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 LRRC42Q9Y546 428 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 A0A0J9YY10 115 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 OC90Q02509 493 aaPredicted RBP13.04□□□□□ -0.32
DDX54-202ENST00000314045 HMGN2P46Q86SG4 172 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 AQP11Q8NBQ7 271 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
DDX54-202ENST00000314045 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 HCN4Q9Y3Q4 1203 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 POM121BA6NF01 834 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 GABRR3A8MPY1 467 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 PCDH1Q08174 1060 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 ATP6AP1Q15904 470 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 NNATQ16517 81 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 TECPR1Q7Z6L1 1165 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 GOLM1Q8NBJ4 401 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 BBS10Q8TAM1 723 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 RFKQ969G6 155 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 C1GALT1C1Q96EU7 318 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 DTNBP1Q96EV8 351 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 CXorf21Q9HAI6 301 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 AREL1O15033 823 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 AP1G1O43747 822 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 HNRNPCP07910 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX54-202ENST00000314045 CHRM5P08912 532 aaPredicted RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 ADAM15Q13444 863 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 RAPSNQ13702 412 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 GGTA1PQ4G0N0 100 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 JAZF1Q86VZ6 243 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 RNF168Q8IYW5 571 aaPredicted RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 NAGSQ8N159 534 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 SLC44A3Q8N4M1 653 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 DTWD1Q8N5C7 304 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 OR52E4Q8NGH9 312 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 OR1E3Q8WZA6 343 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 SPATA9Q9BWV2 254 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 NECTIN3Q9NQS3 549 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 SSR3Q9UNL2 185 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 SLC9B1P1A6NJY1 282 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 JMJD7P0C870 316 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 GGT1P19440 569 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 GSTM2P28161 218 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 FMO3P31513 532 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 OR2L8Q8NGY9 312 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 COQ10AQ96MF6 247 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 POT1Q9NUX5 634 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 PCDHGA4Q9Y5G9 962 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 TRBV5-4A0A0C4DH59 114 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 GRXCR2A6NFK2 248 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 BCAT2O15382 392 aaPredicted RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 PCDHGA12O60330 932 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 KRT33AO76009 404 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 CLIC3O95833 236 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 DLGAP3O95886 979 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 DDCP20711 480 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 AHCYP23526 432 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 CSNK2BP67870 215 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 PUS10Q3MIT2 529 aaKnown RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 ARMCX4Q5H9R4 360 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 LINC00471Q8N535 108 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 OR13H1Q8NG92 308 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 UTP4Q969X6 686 aaKnown RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 CIDECQ96AQ7 238 aaPredicted RBP13.03□□□□□ -0.32
DDX54-202ENST00000314045 UCK2Q9BZX2 261 aa13.03□□□□□ -0.32
DDX54-202ENST00000314045 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms