RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 RAP1BP61224 184 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 RAP1AP62834 184 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 NKX3-2P78367 333 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 POU6F2P78424 691 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 DLX2Q07687 328 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CBLBQ13191 982 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SMAD4Q13485 552 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 IL18Q14116 193 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SDHAF4Q5VUM1 108 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF101Q8IZC7 436 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TEX29Q8N6K0 151 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 DNAAF1Q8NEP3 725 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 OR2T4Q8NH00 348 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 RHBDD1Q8TEB9 315 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 LRRC58Q96CX6 371 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 UNKLQ9H9P5 680 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TXNRD2Q9NNW7 524 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SIRPGQ9P1W8 387 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SBF2Q86WG5 1849 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 DOCK8Q8NF50 2099 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 A0A0G2JMP0 313 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 BHMG1C9JSJ3 638 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ORC5O43913 435 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PPP1R11O60927 126 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 STC2O76061 302 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ATP6V1G2O95670 118 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TGFB1P01137 390 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 FCGR2AP12318 317 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CDH1P12830 882 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ALOX12P18054 663 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 XKP51811 444 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 RACK1P63244 317 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF423Q2M1K9 1284 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF829Q3KNS6 432 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 RNF19BQ6ZMZ0 732 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 HFE2Q6ZVN8 426 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 MAMDC2Q7Z304 686 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM135Q86UB9 458 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TXNDC5Q8NBS9 432 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 UXS1Q8NBZ7 420 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 OR4M2Q8NGB6 313 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 LNX1Q8TBB1 728 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CHPT1Q8WUD6 406 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CYB5D2Q8WUJ1 264 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 LRRN4Q8WUT4 740 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ZFYVE21Q9BQ24 234 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PHF7Q9BWX1 381 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 KCNK13Q9HB14 408 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CCDC59Q9P031 241 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PPP4R1LQ9P1A2 415 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF831Q5JPB2 1677 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ABCA3Q99758 1704 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 IGKV6-21A0A0C4DH24 114 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 A0A0G2JPF8 293 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 IQCMA0A1B0GVH7 501 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 RCCD1A6NED2 376 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 HNRNPCL3B7ZW38 293 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 L7N2F9 121 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PRKYO43930 277 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 MRPS14O60783 128 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 LEFTY1O75610 366 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SCAF4O95104 1147 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 KLF8O95600 359 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 MSL3P1P0C860 447 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 HNRNPCL4P0DMR1 293 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CLUP10909 449 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF43P17038 809 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 FDXRP22570 491 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 DCDC1P59894 354 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 VAMP2P63027 116 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SCARB2Q14108 478 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 CHRNA6Q15825 494 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 FAM26DQ5JW98 314 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ATG9BQ674R7 924 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SLC27A4Q6P1M0 643 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ULK3Q6PHR2 472 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 SHQ1Q6PI26 577 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 KIF2BQ8N4N8 673 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 JOSD2Q8TAC2 188 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 GCDHQ92947 438 aaPredicted RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PPM1MQ96MI6 270 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 MND1Q9BWT6 205 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 POLR2J2Q9GZM3 115 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PAIP1Q9H074 479 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 LMAN1LQ9HAT1 526 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 KLHL21Q9UJP4 597 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PADI1Q9ULC6 663 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 PDE10AQ9Y233 779 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 MRPS7Q9Y2R9 242 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 WDR81Q562E7 1941 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TNRC6CQ9HCJ0 1690 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 A0A1W2PPC1 479 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 RHCEP18577 417 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 S100A1P23297 94 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ERP29P30040 261 aaKnown RBP3.06□□□□□ -1.92
CLOCK-201ENST00000309964 HOXD12P35452 270 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 TAS2R40P59535 323 aa3.06□□□□□ -1.92
CLOCK-201ENST00000309964 ARG2P78540 354 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms