RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PFDN4Q9NQP4 134 aa18.58■□□□□ 0.57
VEGFB-201ENST00000309422 NECTIN3Q9NQS3 549 aa18.58■□□□□ 0.57
VEGFB-201ENST00000309422 FARSBQ9NSD9 589 aaKnown RBP18.58■□□□□ 0.57
VEGFB-201ENST00000309422 COPS7AQ9UBW8 275 aa18.58■□□□□ 0.57
VEGFB-201ENST00000309422 TIMM22Q9Y584 194 aa18.58■□□□□ 0.57
VEGFB-201ENST00000309422 GNG14A0A1W2PPG7 69 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 A8MUA0 341 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 TYROBPO43914 113 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 EEDO75530 441 aaKnown RBP18.57■□□□□ 0.56
VEGFB-201ENST00000309422 C1QL1O75973 258 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 TCHHL1Q5QJ38 904 aaPredicted RBP18.57■□□□□ 0.56
VEGFB-201ENST00000309422 NUDCD3Q8IVD9 361 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 RBM18Q96H35 190 aaKnown RBP18.57■□□□□ 0.56
VEGFB-201ENST00000309422 LMF1Q96S06 567 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 GATA5Q9BWX5 397 aaPredicted RBP18.57■□□□□ 0.56
VEGFB-201ENST00000309422 ALOXE3Q9BYJ1 711 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 KCMF1Q9P0J7 381 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 FIS1Q9Y3D6 152 aa18.57■□□□□ 0.56
VEGFB-201ENST00000309422 A0A1B0GTL3 188 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 AZIN1O14977 448 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 ITGAMP11215 1152 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 SERPINB4P48594 390 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 CLCN2P51788 898 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 EFNA3P52797 238 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 Q0VFX4 171 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 CASP8Q14790 479 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 MEP1AQ16819 746 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 HHATQ5VTY9 493 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 IGFL3Q6UXB1 125 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 EXOC3L1Q86VI1 746 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 KIRREL3Q8IZU9 778 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 C1orf52Q8N6N3 182 aaKnown RBP18.56■□□□□ 0.56
VEGFB-201ENST00000309422 B3GNT7Q8NFL0 401 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 PNPLA2Q96AD5 504 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 VMP1Q96GC9 406 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 KCNA7Q96RP8 456 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 PAIP2Q9BPZ3 127 aaKnown RBP18.56■□□□□ 0.56
VEGFB-201ENST00000309422 MECRQ9BV79 373 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 SHCBP1LQ9BZQ2 653 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 NKIRAS1Q9NYS0 192 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 MAP10Q9P2G4 905 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 ZNF225Q9UK10 706 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 PSME2Q9UL46 239 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 ATG4BQ9Y4P1 393 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 ATMQ13315 3056 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 NUP210LQ5VU65 1888 aa18.56■□□□□ 0.56
VEGFB-201ENST00000309422 TTLL8A6PVC2 850 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 SLC28A1O00337 649 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 FCHO1O14526 889 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 RGS14O43566 566 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 PCDH7O60245 1069 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 LDB3O75112 727 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 AIFM1O95831 613 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 GBAP04062 536 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 PDGFAP04085 211 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 BPGMP07738 259 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 PIK3R1P27986 724 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 GSTM5P46439 218 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 HNRNPH2P55795 449 aaKnown RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 TRA2BP62995 288 aaKnown RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 MFRPQ9BY79 579 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 DEFB126Q9BYW3 111 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 ACPTQ9BZG2 426 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.55■□□□□ 0.568e-9■■□□□ 14.2
VEGFB-201ENST00000309422 B3GNT3Q9Y2A9 372 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 C1orf226A1L170 272 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 C17orf105B2RV13 164 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 K7EM74 188 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 BIRC5O15392 142 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 PROM1O43490 865 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 TMPRSS11DO60235 418 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 RSL1D1O76021 490 aaKnown RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 SNUPNO95149 360 aaKnown RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 HSPA4LO95757 839 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 CELA2AP08217 269 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 HNRNPFP52597 415 aaKnown RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 FOLH1Q04609 750 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 GALNT1Q10472 559 aaPredicted RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 TLR1Q15399 786 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 NDUFAF5Q5TEU4 345 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 C18orf63Q68DL7 685 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 MRM1Q6IN84 353 aaKnown RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 HDXQ7Z353 690 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 SHISA5Q8N114 240 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 TMEM52Q8NDY8 209 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 DNAJB14Q8TBM8 379 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 ZNF717Q9BY31 904 aaPredicted RBP18.55■□□□□ 0.56
VEGFB-201ENST00000309422 GIMAP4Q9NUV9 329 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 VTI1BQ9UEU0 232 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 MCM8Q9UJA3 840 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 ASB4Q9Y574 426 aa18.55■□□□□ 0.56
VEGFB-201ENST00000309422 CACNA1GO43497 2377 aa18.54■□□□□ 0.56
VEGFB-201ENST00000309422 SCN3AQ9NY46 2000 aa18.54■□□□□ 0.56
VEGFB-201ENST00000309422 TRBV11-1A0A0K0K1C0 115 aa18.54■□□□□ 0.56
VEGFB-201ENST00000309422 UBFD1O14562 309 aaKnown RBP18.54■□□□□ 0.56
VEGFB-201ENST00000309422 SUV39H1O43463 412 aa18.54■□□□□ 0.56
VEGFB-201ENST00000309422 ALOX15P16050 662 aaPredicted RBP18.54■□□□□ 0.56
VEGFB-201ENST00000309422 CREB1P16220 341 aa18.54■□□□□ 0.56
VEGFB-201ENST00000309422 STT3AP46977 705 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms