RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 VPS50Q96JG6 964 aa20.75■□□□□ 0.91
SNUPN-201ENST00000308588 WDR77Q9BQA1 342 aaPredicted RBP20.75■□□□□ 0.91
SNUPN-201ENST00000308588 WASHC1A8K0Z3 465 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 KLF11O14901 512 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 PCDH7O60245 1069 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 LDB3O75112 727 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 HPP00738 406 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 TLX1P31314 330 aaPredicted RBP20.74■□□□□ 0.91
SNUPN-201ENST00000308588 TIA1P31483 386 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNUPN-201ENST00000308588 SFT2D3Q587I9 215 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 XKR7Q5GH72 579 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 CLNKQ7Z7G1 428 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 ANKRD9Q96BM1 317 aaPredicted RBP20.74■□□□□ 0.91
SNUPN-201ENST00000308588 METTL2AQ96IZ6 378 aaKnown RBP20.74■□□□□ 0.91
SNUPN-201ENST00000308588 C3orf30Q96M34 536 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 PNPOQ9NVS9 261 aa20.74■□□□□ 0.91
SNUPN-201ENST00000308588 LSM1O15116 133 aaKnown RBP20.73■□□□□ 0.91
SNUPN-201ENST00000308588 SKAP2O75563 359 aaPredicted RBP20.73■□□□□ 0.91
SNUPN-201ENST00000308588 JUNP05412 331 aaKnown RBP20.73■□□□□ 0.91
SNUPN-201ENST00000308588 NR2F6P10588 404 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 NR1D1P20393 614 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 OR4D2P58180 307 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 TRA2BP62995 288 aaKnown RBP20.73■□□□□ 0.91
SNUPN-201ENST00000308588 OCRLQ01968 901 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 NDUFAF5Q5TEU4 345 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 AMER2Q8N7J2 671 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 TANKQ92844 425 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 IMMP1LQ96LU5 166 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 EBPLQ9BY08 206 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 LRTM1Q9HBL6 345 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 ZNF160Q9HCG1 818 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 ATP13A2Q9NQ11 1180 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 INTS9Q9NV88 658 aaKnown RBP20.73■□□□□ 0.91
SNUPN-201ENST00000308588 C1orf109Q9NX04 203 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 NSG1A0A0A6YYJ2 146 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 GLOD5A6NK44 160 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 PGRMC2O15173 223 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 FGF17O60258 216 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 SEC22BO75396 215 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 SEC24DO94855 1032 aaPredicted RBP20.73■□□□□ 0.91
SNUPN-201ENST00000308588 CCL11P51671 97 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 POLE2P56282 527 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 Q0VFX4 171 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 NR6A1Q15406 480 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 PCSK4Q6UW60 755 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 CLEC1AQ8NC01 280 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 FAM76AQ8TAV0 307 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 CCT7Q99832 543 aa20.73■□□□□ 0.91
SNUPN-201ENST00000308588 ATMQ13315 3056 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 ATP6AP2A0A1C7CYW4 349 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 GNG14A0A1W2PPG7 69 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 ERVH48-1M5A8F1 160 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 GUCY1B2O75343 617 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 ATP6AP2O75787 350 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 ANXA4P09525 319 aaPredicted RBP20.72■□□□□ 0.91
SNUPN-201ENST00000308588 PPP2R1BP30154 601 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 ID2Q02363 134 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 AIMP2Q13155 320 aaKnown RBP20.72■□□□□ 0.91
SNUPN-201ENST00000308588 RFTN2Q52LD8 501 aaPredicted RBP20.72■□□□□ 0.91
SNUPN-201ENST00000308588 NOXRED1Q6NXP6 359 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 RIPOR1Q6ZS17 1223 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 OR4N5Q8IXE1 308 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 KIRREL3Q8IZU9 778 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 MMP21Q8N119 569 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 DNAJB14Q8TBM8 379 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 C19orf60Q96EN9 201 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 TUBB6Q9BUF5 446 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 ALOXE3Q9BYJ1 711 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 WDR41Q9HAD4 459 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 MED4Q9NPJ6 270 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 RIC8BQ9NVN3 520 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 POLR3HQ9Y535 204 aaPredicted RBP20.72■□□□□ 0.91
SNUPN-201ENST00000308588 PCDHA9Q9Y5H5 950 aa20.72■□□□□ 0.91
SNUPN-201ENST00000308588 NBEAQ8NFP9 2946 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 MYOCOSA0A1B0GUC4 107 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 SOX8P57073 446 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 TAS2R50P59544 299 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 IGLV3-21P80748 117 aaPredicted RBP20.71■□□□□ 0.91
SNUPN-201ENST00000308588 FOLH1Q04609 750 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 ACTN3Q08043 901 aaPredicted RBP20.71■□□□□ 0.91
SNUPN-201ENST00000308588 STX4Q12846 297 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 PDCD2Q16342 344 aaPredicted RBP20.71■□□□□ 0.91
SNUPN-201ENST00000308588 HSP90B2PQ58FF3 399 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 PAPD4Q6PIY7 484 aaKnown RBP20.71■□□□□ 0.91
SNUPN-201ENST00000308588 PARP9Q8IXQ6 854 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 C16orf78Q8WTQ4 265 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 FCRL1Q96LA6 429 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 GIMAP2Q9UG22 337 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 DLGAP4Q9Y2H0 992 aa20.71■□□□□ 0.91
SNUPN-201ENST00000308588 DYNC1I1O14576 645 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 CEACAM4O75871 244 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 FAM87AP0C7U9 286 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 GALNTL6Q49A17 601 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 OR52E8Q6IFG1 317 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.7■□□□□ 0.91e-8■■■■■ 26.9
SNUPN-201ENST00000308588 DYDC1Q8WWB3 177 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 LPAR4Q99677 370 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 ARHGAP9Q9BRR9 750 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 HEY2Q9UBP5 337 aa20.7■□□□□ 0.9
SNUPN-201ENST00000308588 VTI1BQ9UEU0 232 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms