RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 METTL27Q8N6F8 245 aaPredicted RBP12.92□□□□□ -0.34
TRIM56-201ENST00000306085 NTAN1Q96AB6 310 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 RBP7Q96R05 134 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PXDNLA1KZ92 1463 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 RETP07949 1114 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TAF1AQ15573 450 aaPredicted RBP12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF100Q8IYN0 542 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 P2RY13Q9BPV8 354 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TRBV2A0A0J9YWF9 115 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 AQP12BA6NM10 295 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 BTNL10A8MVZ5 291 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 C8orf89P0DMQ9 161 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 P2RX1P51575 399 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CAMK2DQ13557 499 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PAQR8Q8TEZ7 354 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TAAR8Q969N4 342 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 FUNDC2Q9BWH2 189 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 WDR26Q9H7D7 661 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
TRIM56-201ENST00000306085 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF423Q2M1K9 1284 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 TDP1Q9NUW8 608 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PPM1HQ9ULR3 514 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 GGT2P36268 569 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ACTR1BP42025 376 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 NKPD1Q17RQ9 610 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PYCR2Q96C36 320 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 UQCC2Q9BRT2 126 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 TGIF2Q9GZN2 237 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FKBPLQ9UIM3 349 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 MAGEB4O15481 346 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PMS2P3Q13401 168 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 AGAP7PQ5VUJ5 663 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 AGAP6Q5VW22 663 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 NAPRTQ6XQN6 538 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PXYLP1Q8TE99 480 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 RSPRY1Q96DX4 576 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 AGAP4Q96P64 663 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 TSPAN10Q9H1Z9 355 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 HIPK2Q9H2X6 1198 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 GGT3PA6NGU5 568 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 WASH4PA8MWX3 477 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 DNM1LO00429 736 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 MT-ND2P03891 347 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FAM83FQ8NEG4 500 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 OR4Q3Q8NH05 313 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 HS6ST2Q96MM7 605 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 OR1F2PQ96R84 312 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CDC6Q99741 560 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 NUSAP1Q9BXS6 441 aaKnown RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF230Q9UIE0 474 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ZFR2Q9UPR6 939 aaKnown RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CPQQ9Y646 472 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 GBAP04062 536 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 DCNP07585 359 aaKnown RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 HMGCS1Q01581 520 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FLYWCH1Q4VC44 716 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ATG9BQ674R7 924 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 MYLIPQ8WY64 445 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PITX2Q99697 317 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PAK1IP1Q9NWT1 392 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 SLC22A2O15244 555 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 TXNDC12O95881 172 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 HOXC6P09630 235 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CKMT1AP12532 417 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PTGER3P43115 390 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 DGKGP49619 791 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ESCO2Q56NI9 601 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FAM205BPQ63HN1 556 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 TLDC1Q6P9B6 456 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM151BQ8IW70 566 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 SNX18Q96RF0 628 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CD300AQ9UGN4 299 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 SNAP29O95721 258 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FGFBP1Q14512 234 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PRAMEF14Q5SWL7 426 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF648Q5T619 568 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ADGRD1Q6QNK2 874 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ADAM19Q9H013 955 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CXXC1Q9P0U4 656 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FNIP2Q9P278 1114 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PCDHA2Q9Y5H9 948 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FAM227AF5H4B4 570 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 OXTRP30559 389 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 CDONQ4KMG0 1287 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF574Q6ZN55 896 aaPredicted RBP12.91□□□□□ -0.34
TRIM56-201ENST00000306085 PLEKHG7Q6ZR37 379 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 FAM118AQ9NWS6 357 aa12.91□□□□□ -0.34
TRIM56-201ENST00000306085 RFC2P35250 354 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 GRB2P62993 217 aaKnown RBP12.9□□□□□ -0.34
TRIM56-201ENST00000306085 UBXN2BQ14CS0 331 aa12.9□□□□□ -0.34
TRIM56-201ENST00000306085 ACSBG2Q5FVE4 666 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms