RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 OR2AP1Q8NGE2 309 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 GATAD2BQ8WXI9 593 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PTPN18Q99952 460 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM185BQ9H7F4 350 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PAQR5Q9NXK6 330 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 Q9Y3F1 56 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 C2orf92A0A1B0GVN3 265 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 IFNA17P01571 189 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ALDOAP04075 364 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SUOXP51687 545 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ART1P52961 327 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CLRN1P58418 232 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 RAB11BQ15907 218 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 METTL11BQ5VVY1 283 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 AGTRAPQ6RW13 159 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CNIH3Q8TBE1 160 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CLEC4CQ8WTT0 213 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF516Q92618 1163 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PNO1Q9NRX1 252 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 RXFP3Q9NSD7 469 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SEPT4O43236 478 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PAK4O96013 591 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CSF1P09603 554 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ACRV1P26436 265 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 KCNAB2Q13303 367 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM236Q5W0B7 351 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 NOXRED1Q6NXP6 359 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CCBE1Q6UXH8 406 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TPRG1Q6ZUI0 275 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SLAIN1Q8ND83 568 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 OR13C4Q8NGS5 318 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 OR5P2Q8WZ92 322 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SLC25A36Q96CQ1 311 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TRMT61BQ9BVS5 477 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ADAMTS6Q9UKP5 1117 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 STYXL1Q9Y6J8 313 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 COL2A1P02458 1487 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 A0A0G2JMP0 313 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF705EA8MWA4 302 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ADAP00813 363 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 JUNP05412 331 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ITGAMP11215 1152 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 EFNA1P20827 205 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 MAGEA11P43364 429 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 GDI2P50395 445 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 POU6F2P78424 691 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 OGDHQ02218 1023 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 NIPAL4Q0D2K0 466 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 IRF5Q13568 498 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 C6orf136Q5SQH8 315 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PLA2G15Q8NCC3 412 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 OR4M2Q8NGB6 313 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 OR10T2Q8NGX3 314 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SCRN2Q96FV2 425 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SIGLEC10Q96LC7 697 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ADAP2Q9NPF8 381 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PLSCR1O15162 318 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 RNF13O43567 381 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ELOAQ14241 798 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CHRNA6Q15825 494 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 DCAF4L2Q8NA75 395 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 NSMAFQ92636 917 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TREX2Q9BQ50 279 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 XPNPEP1Q9NQW7 623 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 RNF11Q9Y3C5 154 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 KCPQ6ZWJ8 1503 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 UGDHO60701 494 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ADH5P11766 374 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 FAM69AQ5T7M9 428 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 DUS1LQ6P1R4 473 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 KBTBD6Q86V97 674 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 NRROSQ86YC3 692 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TCEANCQ8N8B7 351 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 OR9I1Q8NGQ6 314 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ARNTL2Q8WYA1 636 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 JSRP1Q96MG2 331 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM74Q96NL1 305 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 URM1Q9BTM9 101 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 FUNDC2Q9BWH2 189 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 MROQ9BYG7 248 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 OR51F1A6NGY5 319 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 C1orf196B1AJZ1 125 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 AHSA1O95433 338 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 MAP2K4P45985 399 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 PRKXP51817 358 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 HK3P52790 923 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 MRPS10P82664 201 aaKnown RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 EXOC3L2Q2M3D2 409 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 GTF2IRD2BQ6EKJ0 949 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 UNC5DQ6UXZ4 953 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 GTF2IRD2Q86UP8 949 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ZSCAN4Q8NAM6 433 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ASB12Q8WXK4 309 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 THAP4Q8WY91 577 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 TLE6Q9H808 572 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 RNF19AQ9NV58 838 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 NDUFAF4Q9P032 175 aa7.34□□□□□ -1.23
SF3B3-201ENST00000302516 AJAP1Q9UKB5 411 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-201ENST00000302516 ECM29Q5VYK3 1845 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms