RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ITM2CQ9NQX7 267 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 IFT52Q9Y366 437 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
HIF3A-204ENST00000300862 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
HIF3A-204ENST00000300862 REV3LO60673 3130 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 TRBV4-1A0A0J9YWV2 114 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 WASHC1A8K0Z3 465 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 FFAR1O14842 300 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 SH3BP5O60239 455 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 PRNPP04156 253 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 SRPRAP08240 638 aaKnown RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ARAFP10398 606 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ADRB3P13945 408 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 MAGP20916 626 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 PTGER1P34995 402 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 LIM2P55344 173 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 PCBP3P57721 371 aaKnown RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 DOC2BQ14184 412 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ZNF630Q2M218 657 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 CRB2Q5IJ48 1285 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 WASH2PQ6VEQ5 465 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 OLIG3Q7RTU3 272 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 C11orf96Q7Z7L8 435 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 HMGN2P46Q86SG4 172 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 C12orf76Q8N812 135 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ANKRD53Q8N9V6 530 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 IL4I1Q96RQ9 567 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 WFDC6Q9BQY6 131 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 CHCHD6Q9BRQ6 235 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 CENPOQ9BU64 300 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 MIR1-1HGQ9H1L0 117 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 EPHX3Q9H6B9 360 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 THSD1Q9NS62 852 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 HCN4Q9Y3Q4 1203 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 MTCL1Q9Y4B5 1905 aaKnown RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 CCNB2O95067 398 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 SOX14O95416 240 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ITGA2P17301 1181 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 PTX3P26022 381 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 MAPK9P45984 424 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 MAPK12P53778 367 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 CSNK2BP67870 215 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 UAP1L1Q3KQV9 507 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ARMCX4Q5H9R4 360 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 STEAP3Q658P3 488 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 KLHL17Q6TDP4 642 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 SZRD1Q7Z422 152 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 RBM45Q8IUH3 476 aaKnown RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 TAGAPQ8N103 731 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 LSM14AQ8ND56 463 aaKnown RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 SLC38A5Q8WUX1 472 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 OTUB1Q96FW1 271 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 Q96MT0 163 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 OR5M11Q96RB7 305 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 LGR4Q9BXB1 951 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 NLNQ9BYT8 704 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 EPS8L2Q9H6S3 715 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 NMNAT1Q9HAN9 279 aaPredicted RBP12.28□□□□□ -0.44
HIF3A-204ENST00000300862 PLCXD1Q9NUJ7 323 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ANGPT4Q9Y264 503 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 ENPP4Q9Y6X5 453 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 DOCK9Q9BZ29 2069 aa12.28□□□□□ -0.44
HIF3A-204ENST00000300862 CARNS1A5YM72 827 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 A6NL46 340 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 H7BY64 318 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 PPM1DO15297 605 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 TBX1O43435 398 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 PI15O43692 258 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 MRPS14O60783 128 aaKnown RBP12.27□□□□□ -0.44
HIF3A-204ENST00000300862 B4GALT2O60909 372 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 SEMA7AO75326 666 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 KRT75O95678 551 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 DNTTP04053 509 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 CHMP24386 653 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 ITGB7P26010 798 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 CNR2P34972 360 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 SEPHS1P49903 392 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 MANFP55145 182 aaKnown RBP12.27□□□□□ -0.44
HIF3A-204ENST00000300862 C10orf62Q5T681 223 aaPredicted RBP12.27□□□□□ -0.44
HIF3A-204ENST00000300862 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 SLC46A3Q7Z3Q1 461 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 FAM129CQ86XR2 697 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 KIAA1958Q8N8K9 716 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 OR2L2Q8NH16 312 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 VANGL1Q8TAA9 524 aaPredicted RBP12.27□□□□□ -0.44
HIF3A-204ENST00000300862 TFGQ92734 400 aaPredicted RBP12.27□□□□□ -0.44
HIF3A-204ENST00000300862 EXOSC8Q96B26 276 aaKnown RBP12.27□□□□□ -0.44
HIF3A-204ENST00000300862 PRAP1Q96NZ9 151 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 OR52A5Q9H2C5 316 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 C11orf16Q9NQ32 467 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 FKBP14Q9NWM8 211 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 IRAK3Q9Y616 596 aa12.27□□□□□ -0.44
HIF3A-204ENST00000300862 DSCR3O14972 297 aa12.27□□□□□ -0.45
HIF3A-204ENST00000300862 IFNW1P05000 195 aa12.27□□□□□ -0.45
HIF3A-204ENST00000300862 PIK3CBP42338 1070 aa12.27□□□□□ -0.45
HIF3A-204ENST00000300862 LIMS1P48059 325 aa12.27□□□□□ -0.45
HIF3A-204ENST00000300862 ZNF404Q494X3 552 aa12.27□□□□□ -0.45
HIF3A-204ENST00000300862 WDR53Q7Z5U6 358 aaPredicted RBP12.27□□□□□ -0.45
HIF3A-204ENST00000300862 AMER3Q8N944 861 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms