RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CDK6Q00534 326 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ZNF404Q494X3 552 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ZDHHC20Q5W0Z9 365 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 RAET1GQ6H3X3 334 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 BRAT1Q6PJG6 821 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 PAMR1Q6UXH9 720 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 VANGL1Q8TAA9 524 aaPredicted RBP12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ZNF675Q8TD23 568 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
CTDP1-202ENST00000299543 HRASLS5Q96KN8 279 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 SPNS1Q9H2V7 528 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 C11orf16Q9NQ32 467 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 GPATCH2Q9NW75 528 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 HSPE1-MOB4S4R3N1 261 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 SAGE2PA6NJ88 616 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 FGF18O76093 207 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 PTHP01270 115 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ZNF250P15622 560 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 NUMA1Q14980 2115 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ZMAT1Q5H9K5 638 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 RPS26P11Q5JNZ5 115 aaPredicted RBP12.84□□□□□ -0.35
CTDP1-202ENST00000299543 TOR2AQ5JU69 321 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 RAB8BQ92930 207 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 SNX18Q96RF0 628 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 REEP4Q9H6H4 257 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 TAS2R9Q9NYW1 312 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ERVW-1Q9UQF0 538 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 PRAMEF33A0A0G2JMD5 474 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 AGAP5A6NIR3 686 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
CTDP1-202ENST00000299543 PRAMEF10O60809 474 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 STATHP02808 62 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 CTSLP07711 333 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 PSKH1P11801 424 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 ZNF763Q0D2J5 394 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 TEAD4Q15561 434 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 FAHD1Q6P587 224 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 TUBA3EQ6PEY2 450 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 MSANTD1Q6ZTZ1 278 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 SLC51BQ86UW2 128 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 FAM217AQ8IXS0 508 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 FBLIM1Q8WUP2 373 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 OTUB1Q96FW1 271 aaPredicted RBP12.84□□□□□ -0.35
CTDP1-202ENST00000299543 FAM129BQ96TA1 746 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 UCK2Q9BZX2 261 aa12.84□□□□□ -0.35
CTDP1-202ENST00000299543 THSD7BQ9C0I4 1608 aa12.83□□□□□ -0.35
CTDP1-202ENST00000299543 A0A1W2PRB8 838 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 TRBC2A0A5B9 178 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 C5orf58C9J3I9 102 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 H0YIV9 168 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 TRIM77I1YAP6 450 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 M0R082 166 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 GADD45GO95257 159 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 HOXB6P17509 224 aaKnown RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 POLR2CP19387 275 aaPredicted RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 GRK5P34947 590 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 SPIN4Q56A73 249 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 PLPP4Q5VZY2 271 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 PTCHD4Q6ZW05 846 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 ADIPOR2Q86V24 386 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 TMC8Q8IU68 726 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CHTF18Q8WVB6 975 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 GPBP1L1Q9HC44 474 aaPredicted RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 TDP1Q9NUW8 608 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 ASF1AQ9Y294 204 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 C1orf226A1L170 272 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 H3BN98 237 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 LZTS3O60299 673 aaPredicted RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 EFEMP2O95967 443 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 IL3P08700 152 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 PPIBP23284 216 aaKnown RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 PTGER1P34995 402 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 GGT2P36268 569 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 TGFBR2P37173 567 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 SLCO4C1Q6ZQN7 724 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 SLAIN1Q8ND83 568 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 POP5Q969H6 163 aaKnown RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 MSANTD3Q96H12 275 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 RNF170Q96K19 258 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 EPYCQ99645 322 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 SPHK2Q9NRA0 654 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CTPS2Q9NRF8 586 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CHD7Q9P2D1 2997 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 BTNL2Q9UIR0 455 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 EXO1Q9UQ84 846 aaKnown RBP12.83□□□□□ -0.36
CTDP1-202ENST00000299543 HCN4Q9Y3Q4 1203 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 PNMA8CA0A1B0GUJ8 204 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 B8ZZF3 427 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CKMT1AP12532 417 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 CSF2RAP15509 400 aa12.83□□□□□ -0.36
CTDP1-202ENST00000299543 ZNF30P17039 623 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms