RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 SCN1BQ07699 218 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 IQCHQ86VS3 1027 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 CAPNS2Q96L46 248 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 HCFC1R1Q9NWW0 138 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 CCL26Q9Y258 94 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 SNX11Q9Y5W9 270 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 WNT6Q9Y6F9 365 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 TRBV23OR9-2A0A075B6M9 112 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 C2orf92A0A1B0GVN3 265 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 ATG13O75143 517 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 HNMTP50135 292 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 TMEM115Q12893 351 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 KLHL12Q53G59 568 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 FRMPD2BQ6IN97 320 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 ELMOD1Q8N336 334 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 TESCQ96BS2 214 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 LRR1Q96L50 414 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 DHRS1Q96LJ7 313 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 COQ7Q99807 217 aa12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 ZNF624Q9P2J8 865 aaPredicted RBP12.71□□□□□ -0.37
TNFRSF21-201ENST00000296861 NAT2P11245 290 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 JUNDP17535 347 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 CELP19835 753 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 IDSP22304 550 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 HOXD10P28358 340 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 BMPR1AP36894 532 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 CXCR4P61073 352 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 POLR2LP62875 67 aaKnown RBP12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF763Q0D2J5 394 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 TBCEQ15813 527 aaPredicted RBP12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 LAPTM4BQ86VI4 370 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 GEMIN6Q8WXD5 167 aaKnown RBP12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 KLHL6Q8WZ60 621 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 PIP5K1AQ99755 562 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 BCL7BQ9BQE9 202 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 REEP4Q9H6H4 257 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 TAC3Q9UHF0 121 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 HSPB11Q9Y547 144 aa12.71□□□□□ -0.38
TNFRSF21-201ENST00000296861 TRBV5-3A0A0A0MS03 114 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 MEIOCA2RUB1 952 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 H7BY64 318 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 INHAP05111 366 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 FCER2P06734 321 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 C1SP09871 688 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR12D1P0DN82 309 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 TIE1P35590 1138 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 AVPR1BP47901 424 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 GINS1Q14691 196 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 GDPD4Q6W3E5 623 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 ATP6V1C2Q8NEY4 427 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 OMA1Q96E52 524 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 TMEM19Q96HH6 336 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 PRAP1Q96NZ9 151 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 UCK2Q9BZX2 261 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 MKLN1Q9UL63 735 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 SH2B3Q9UQQ2 575 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 DNAH14Q0VDD8 3507 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 NR2F6P10588 404 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 PTPN6P29350 595 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 TLE2Q04725 743 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 C7orf34Q96L11 122 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR4K3Q96R72 315 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC6A16Q9GZN6 736 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 HMX1Q9NP08 348 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZCCHC3Q9NUD5 404 aaKnown RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 FZD6O60353 706 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 NTN1O95631 604 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 APEX1P27695 318 aaKnown RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 HEPACAMQ14CZ8 416 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 MPPE1Q53F39 396 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC35F1Q5T1Q4 408 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 JPH3Q8WXH2 748 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 PIK3R3Q92569 461 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 SPNS1Q9H2V7 528 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 TRIM45Q9H8W5 580 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 RABL2AQ9UBK7 228 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 MAN2B2Q9Y2E5 1009 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 DOCK6Q96HP0 2047 aa12.7□□□□□ -0.38
TNFRSF21-201ENST00000296861 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 CD8B2A6NJW9 211 aa12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 CPSF4LA6NMK7 179 aaKnown RBP12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 ANHXE9PGG2 379 aa12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 H3BSH0 61 aa12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 HYAL3O43820 417 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 CD8BP10966 210 aa12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 IL7P13232 177 aa12.69□□□□□ -0.38
TNFRSF21-201ENST00000296861 RPS3P23396 243 aaKnown RBP eCLIP12.69□□□□□ -0.383e-21■■□□□ 13.3
TNFRSF21-201ENST00000296861 MYL9P24844 172 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms