RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ISCA2Q86U28 154 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 S100PBPQ96BU1 408 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 C14orf105Q9NVL8 296 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 PCDHB14Q9Y5E9 798 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 C4AP0C0L4 1744 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 C4BP0C0L5 1744 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 B4DGG1 531 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 PCDH17O14917 1159 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 VNN2O95498 520 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 PCSK2P16519 638 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 CCND3P30281 292 aaPredicted RBP14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 ZNF33AQ06730 810 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 HSD17B12Q53GQ0 312 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 C2orf27AQ580R0 203 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 ARFGAP1Q8N6T3 406 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 GATSQ8NAP1 163 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 CD300LFQ8TDQ1 290 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 ZNF486Q96H40 463 aaPredicted RBP14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 SLC38A3Q99624 504 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 ZNF304Q9HCX3 659 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 HEBP2Q9Y5Z4 205 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 CARNS1A5YM72 827 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 TSPAN6O43657 245 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 FKTNO75072 461 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 C10orf62Q5T681 223 aaPredicted RBP14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 FEVQ99581 238 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 BOCQ9BWV1 1114 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 H0YJX3 145 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 ARL6IP5O75915 188 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 APOC3P02656 99 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 GPR4P46093 362 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 SLC11A1P49279 550 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 PON3Q15166 354 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 FAM214AQ32MH5 1076 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 DPY19L3Q6ZPD9 716 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 OR9Q2Q8NGE9 314 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 SEC61A2Q9H9S3 476 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 HCN3Q9P1Z3 774 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 A0A0U1RQF3 1178 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 BCAS1O75363 584 aaPredicted RBP14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 C7P10643 843 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 CRISP1P54107 249 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 SEC23BQ15437 767 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 METTL27Q8N6F8 245 aaPredicted RBP14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 MTMR10Q9NXD2 777 aa14.73□□□□□ -0.05
SHROOM4-201ENST00000289292 INPPL1O15357 1258 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 FLRT2O43155 660 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 B4GALT2O60909 372 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TMEM115Q12893 351 aaPredicted RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 AMZ1Q400G9 498 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 L3HYPDHQ96EM0 354 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 NLKQ9UBE8 527 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 MGAT4CQ9UBM8 478 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 SH2B3Q9UQQ2 575 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 PCDHB11Q9Y5F2 797 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 MYH1P12882 1939 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 MYH4Q9Y623 1939 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 ZNF860A6NHJ4 632 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 A8MU76 341 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 ZNF821O75541 412 aaPredicted RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 CRYZL1O95825 349 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 HSD17B1P14061 328 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 PNCKQ6P2M8 343 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TMEM107Q6UX40 140 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TMEM17Q86X19 198 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 MEX3DQ86XN8 651 aaKnown RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 NAA50Q9GZZ1 169 aaKnown RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 RANBP3Q9H6Z4 567 aaPredicted RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 PARPBPQ9NWS1 579 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TMEM181Q9P2C4 612 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 ADH5P11766 374 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 F8A1P23610 371 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 SOX3P41225 446 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 RPL35P42766 123 aaKnown RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 FPGSQ05932 587 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TRAM2Q15035 370 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 PDGFRLQ15198 375 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 SPHARQ15513 63 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 XKRXQ6PP77 449 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 Q6ZVL8 140 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 DTWD1Q8N5C7 304 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 OR10T2Q8NGX3 314 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 OR2L2Q8NH16 312 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 GAL3ST3Q96A11 431 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 MSLNLQ96KJ4 702 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 LAMP5Q9UJQ1 280 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 PCTPQ9UKL6 214 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 RHPN2P1A8MT19 583 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 ZNF208O43345 1280 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 CD9P21926 228 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 BRAT1Q6PJG6 821 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TMCO2Q7Z6W1 182 aaPredicted RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 KDM1BQ8NB78 822 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 TSPEARQ8WU66 669 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 FUBP1Q96AE4 644 aaKnown RBP14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 LRR1Q96L50 414 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 IL17FQ96PD4 163 aa14.72□□□□□ -0.05
SHROOM4-201ENST00000289292 CLCA1A8K7I4 914 aa14.71□□□□□ -0.05
SHROOM4-201ENST00000289292 H2AFB2P0C5Z0 115 aa14.71□□□□□ -0.05
SHROOM4-201ENST00000289292 GSTT2P0CG29 244 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms