RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 THAP4Q8WY91 577 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 NTAN1Q96AB6 310 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PYCR2Q96C36 320 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF334Q9HCZ1 680 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 MKS1Q9NXB0 559 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 BCAS2O75934 225 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 OPN1SWP03999 348 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 HK3P52790 923 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ESCO2Q56NI9 601 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.41□□□□□ -1.061e-6■■■■□ 20.8
NIPBL-201ENST00000282516 TRMT10AQ8TBZ6 339 aaKnown RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SLC5A11Q8WWX8 675 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 NANOS1Q8WY41 292 aaKnown RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SCRN2Q96FV2 425 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF681Q96N22 645 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 C17orf62Q9BQA9 187 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FAIMQ9NVQ4 179 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 UBIAD1Q9Y5Z9 338 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FAM186AA6NE01 2351 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 MROH2AA6NES4 1674 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 J3QRK9 145 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 GJB1P08034 283 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 EEF1A1P68104 462 aaKnown RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 EEF1A1P5Q5VTE0 462 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF776Q68DI1 518 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 LIX1LQ8IVB5 337 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 OR9A4Q8NGU2 314 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FBXL8Q96CD0 374 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ACBD6Q9BR61 282 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 TAC3Q9UHF0 121 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 STUB1Q9UNE7 303 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 CABIN1Q9Y6J0 2220 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 A0A087WUU8 490 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 F8W036 122 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SOX30O94993 753 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 C6P13671 934 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 UQCRC2P22695 453 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 BLOC1S1P78537 153 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 C14orf28Q4W4Y0 310 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SNAPC3Q92966 411 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PPA2Q9H2U2 334 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 IL20RAQ9UHF4 553 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 LOXHD1Q8IVV2 1947 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 TECPR2O15040 1411 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 A0A0U1RQK1 487 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 TRAPPC13A5PLN9 417 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 OR6C74A6NCV1 312 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 WNT10BO00744 389 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FCER2P06734 321 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FHP07954 510 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 GABARAPL2P60520 117 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FGL2Q14314 439 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PTCHD3Q3KNS1 767 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FUT10Q6P4F1 479 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 DCUN1D3Q8IWE4 304 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ADAMTS10Q9H324 1103 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 APMAPQ9HDC9 416 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ABCB8Q9NUT2 735 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 FBXO7Q9Y3I1 522 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PCDHGA2Q9Y5H1 932 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 GJE1A6NN92 205 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 VILLO15195 856 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF821O75541 412 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 CSF2P04141 144 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 EEF1A2Q05639 463 aaKnown RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF763Q0D2J5 394 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 MOGSQ13724 837 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 MYLK3Q32MK0 819 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PDSS2Q86YH6 399 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 C1orf52Q8N6N3 182 aaKnown RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF75AQ96N20 296 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 C11orf84Q9BUA3 381 aaPredicted RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 RNF19AQ9NV58 838 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 C1orf167Q5SNV9 1468 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 HEATR1Q9H583 2144 aaKnown RBP8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SPATA31A5Q5VU36 1347 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 SPATA31A7Q8IWB4 1347 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 GOSR2O14653 212 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 HPRP00739 348 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 THBS3P49746 956 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 ACDQ96AP0 544 aa8.41□□□□□ -1.06
NIPBL-201ENST00000282516 PPLO60437 1756 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CPED1A4D0V7 1026 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ZNF182P17025 639 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 C6orf120Q7Z4R8 191 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 TLCD1Q96CP7 247 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 DAZAP1Q96EP5 407 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 DPCDQ9BVM2 203 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 REV1Q9UBZ9 1251 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PCDHGC4Q9Y5F7 938 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 CHD2O14647 1828 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 ADM5C9JUS6 153 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AKR1C4P17516 323 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 GSTM4Q03013 218 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 HNRNPDQ14103 355 aaKnown RBP8.4□□□□□ -1.06
NIPBL-201ENST00000282516 PDGFRLQ15198 375 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 AWAT2Q6E213 333 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 SLC18B1Q6NT16 456 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 IRF2BP2Q7Z5L9 587 aa8.4□□□□□ -1.06
NIPBL-201ENST00000282516 KCTD13Q8WZ19 329 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms