RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 BBS4Q96RK4 519 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 ORAI3Q9BRQ5 295 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 AMBRA1Q9C0C7 1298 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 YIPF3Q9GZM5 350 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 GABARAPL1Q9H0R8 117 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 GLIPR2Q9H4G4 154 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 ACTR10Q9NZ32 417 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 CPNE7Q9UBL6 633 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 FBXW2Q9UKT8 454 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 CES1P1Q9UKY3 287 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 PADI2Q9Y2J8 665 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 ATG4BQ9Y4P1 393 aa9.09□□□□□ -0.95
TRIM55-201ENST00000276573 A0A087WXM4 84 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KIR2DS5A0A0G2JLQ3 304 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 A0A0G2JNG1 304 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KIR2DS3K7RE56 304 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 PROM1O43490 865 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ZNF217O75362 1048 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 PRKRAO75569 313 aaKnown RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 OPN1SWP03999 348 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SMIM10L1P0DMW3 83 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 CTSEP14091 401 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 CDH15P55291 814 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ITGA1P56199 1179 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 UBE2IP63279 158 aaKnown RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 RGS1Q08116 209 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KCNAB2Q13303 367 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KIR2DS5Q14953 304 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SPDYE7PQ495Y7 208 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 IFI44LQ53G44 452 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 C18orf63Q68DL7 685 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 FCRL6Q6DN72 434 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 REEP3Q6NUK4 255 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 THAP5Q7Z6K1 395 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 TAF8Q7Z7C8 310 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ASPGQ86U10 573 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 TRIM73Q86UV7 250 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 CYP4Z1Q86W10 505 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KCT2Q8NC54 265 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 FAM174AQ8TBP5 190 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 RLN3Q8WXF3 142 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 LZICQ8WZA0 190 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 DGCR14Q96DF8 476 aaKnown RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KLHDC7BQ96G42 594 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SMIM10Q96HG1 83 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 FCRL4Q96PJ5 515 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 OR2A5Q96R48 311 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 REEP1Q9H902 201 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 A4GALTQ9NPC4 353 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 POT1Q9NUX5 634 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 TUBA8Q9NY65 449 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 C3orf18Q9UK00 162 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 PILRAQ9UKJ1 303 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 DUSP12Q9UNI6 340 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ANGPT4Q9Y264 503 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 PCDHGB3Q9Y5G1 929 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ORC6Q9Y5N6 252 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 IGHV1OR15-9A0A0B4J2B8 117 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 LOC100130705A0A1B0GUX0 176 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 PRAMEF25A6NGN4 478 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 GLOD5A6NK44 160 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SLC16A6O15403 523 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 OR6B1O95007 311 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 BMP10O95393 424 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 TFPTP0C1Z6 253 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 MAGP20916 626 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 CERS1P27544 350 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ALDH3B2P48448 385 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 RPS26P62854 115 aaKnown RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 BTN3A2P78410 334 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KDM4DQ6B0I6 523 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 TNFAIP8L2Q6P589 184 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SFTPA2Q8IWL1 248 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 FAM160A2Q8N612 972 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 OR10G6Q8NH81 332 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SPPL2AQ8TCT8 520 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ADAMTS16Q8TE57 1224 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 UTP15Q8TED0 518 aaKnown RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SLC38A5Q8WUX1 472 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 HLA-CQ95604 372 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 GAL3ST3Q96A11 431 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 THAP11Q96EK4 314 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 RUBCNLQ9H714 662 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 LTB4R2Q9NPC1 389 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ZSCAN32Q9NX65 697 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 NDUFAF4Q9P032 175 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 PDP1Q9P0J1 537 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ANKMY1Q9P2S6 941 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 RAB23Q9ULC3 237 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 SAMHD1Q9Y3Z3 626 aaKnown RBP9.08□□□□□ -0.96
TRIM55-201ENST00000276573 KLK4Q9Y5K2 254 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 ENTPD2Q9Y5L3 495 aa9.08□□□□□ -0.96
TRIM55-201ENST00000276573 LRP4O75096 1905 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 GSAPA4D1B5 854 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 FAM221BA6H8Z2 402 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 C2orf74A8MZ97 194 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 HMGN4O00479 90 aa9.07□□□□□ -0.96
TRIM55-201ENST00000276573 SH3BP5O60239 455 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms