RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 MSANTD2Q6P1R3 559 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 AFTPHQ6ULP2 937 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 TAS1R3Q7RTX0 852 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 SULF1Q8IWU6 871 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 BPIFCQ8NFQ6 507 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 BEST4Q8NFU0 473 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MRPL38Q96DV4 380 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 PAWRQ96IZ0 340 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 NSUN5Q96P11 429 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 ZIC5Q96T25 663 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MRPL45Q9BRJ2 306 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 ARHGAP39Q9C0H5 1083 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 SIK2Q9H0K1 926 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 C11orf49Q9H6J7 331 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ALG9Q9H6U8 611 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 METTL17Q9H7H0 456 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 ZNF226Q9NYT6 803 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 CLDN4O14493 209 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 DHX15O43143 795 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 TXNL1O43396 289 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 NBNO60934 754 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MOCS2O96007 188 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 HPP00738 406 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 NCF1P14598 390 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 SMPD1P17405 629 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 C4BPBP20851 252 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MATKP42679 507 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 SELENOPP49908 381 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ZP1P60852 638 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 GK2Q14410 553 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 NCF4Q15080 339 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 IRF4Q15306 451 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 C3orf38Q5JPI3 329 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 FAHD1Q6P587 224 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ASB18Q6ZVZ8 466 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 KLBQ86Z14 1044 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 CARFQ8N187 725 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 CCNYQ8ND76 341 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 RXFP4Q8TDU9 374 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MTFMTQ96DP5 389 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 ATG4CQ96DT6 458 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ELMOD3Q96FG2 381 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 RHOVQ96L33 236 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 DDOQ99489 341 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 SSX3Q99909 188 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 TINF2Q9BSI4 451 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 HAPLN2Q9GZV7 340 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 LMAN2LQ9H0V9 348 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 ABHD16BQ9H3Z7 469 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 WBP1LQ9NX94 342 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 MARK1Q9P0L2 795 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 AFF4Q9UHB7 1163 aaKnown RBP8.82□□□□□ -1
PDGFC-201ENST00000274071 UBIAD1Q9Y5Z9 338 aa8.82□□□□□ -1
PDGFC-201ENST00000274071 GRXCR2A6NFK2 248 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 KCNK1O00180 336 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ARNTLO00327 626 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 PRMT3O60678 531 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 VTNP04004 478 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ALDOBP05062 364 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 CD53P19397 219 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 DDX6P26196 483 aaKnown RBP eCLIP8.81□□□□□ -1
PDGFC-201ENST00000274071 SDC2P34741 201 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 BTCP35070 178 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 MMP12P39900 470 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 EVX1P49640 407 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 HMGCS2P54868 508 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 CAV3P56539 151 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 C21orf58P58505 322 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 MTMR1Q13613 665 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 RAB33AQ14088 237 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ST3GAL2Q16842 350 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 INO80DQ53TQ3 878 aaPredicted RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 ELP2Q6IA86 826 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 SCIMPQ6UWF3 145 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 APOBEC3FQ8IUX4 373 aaKnown RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 CPNE4Q96A23 557 aaPredicted RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 OTULINQ96BN8 352 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 MEGF10Q96KG7 1140 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ADAT1Q9BUB4 502 aaKnown RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 RHBGQ9H310 441 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 RERGLQ9H628 205 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 AGO3Q9H9G7 860 aaKnown RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 AGO4Q9HCK5 861 aaKnown RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 RNF19AQ9NV58 838 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 TXNL4BQ9NX01 149 aaKnown RBP8.81□□□□□ -1
PDGFC-201ENST00000274071 ZIM2Q9NZV7 527 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 MED11Q9P086 117 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 PLSCR5A0PG75 271 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 TMEM200CA6NKL6 621 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 RHPN2P1A8MT19 583 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 L7N2F9 121 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 M0R129 80 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 ACKR2O00590 384 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 LANCL1O43813 399 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 SEMA7AO75326 666 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 VPS4BO75351 444 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 RBBP9O75884 186 aa8.81□□□□□ -1
PDGFC-201ENST00000274071 IL1RNP18510 177 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms