RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 LAS2Q8IYD9 372 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 PARP16Q8N5Y8 322 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 FBXO15Q8NCQ5 510 aaPredicted RBP18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SLC5A11Q8WWX8 675 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 EPYCQ99645 322 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 PRR14Q9BWN1 585 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 ASF1AQ9Y294 204 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 CDK1P06493 297 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 FURINP09958 794 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SOX3P41225 446 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 NR4A2P43354 598 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 ARMCX4Q5H9R4 360 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 ATAD3BQ5T9A4 648 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 DESI1Q6ICB0 168 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 PAQR6Q6TCH4 344 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 LINC00299Q6ZSB3 139 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 IQCF1Q8N6M8 205 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 AQP11Q8NBQ7 271 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 GABARAPL3Q9BY60 117 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 TPK1Q9H3S4 243 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 EXOSC4Q9NPD3 245 aaKnown RBP18.16■□□□□ 0.5
CPNE7-201ENST00000268720 IMPAD1Q9NX62 359 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 DNAJC27Q9NZQ0 273 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SLC23A2Q9UGH3 650 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 NUMA1Q14980 2115 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 CLCA1A8K7I4 914 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SNPHO15079 494 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 GASTP01350 101 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 ADORA3P0DMS8 318 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 PNLIPRP1P54315 467 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SELENOWP63302 87 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 FAM78AQ5JUQ0 283 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 NXPE4Q6UWF7 544 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SLC46A3Q7Z3Q1 461 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 VN1R5Q7Z5H4 357 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 B3GNT7Q8NFL0 401 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 WFIKKN2Q8TEU8 576 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 C16orf78Q8WTQ4 265 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 OR8D1Q8WZ84 308 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 YIPF4Q9BSR8 244 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 EFCAB11Q9BUY7 163 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 MMP27Q9H306 513 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 SLAMF7Q9NQ25 335 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 DEC1Q9P2X7 70 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 CLEC2DQ9UHP7 191 aa18.16■□□□□ 0.5
CPNE7-201ENST00000268720 TRBV4-1A0A0J9YWV2 114 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 A6NL46 340 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 CEP290O15078 2479 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 AZGP1P25311 298 aaKnown RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 VASPP50552 380 aaPredicted RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 SF3B4Q15427 424 aaKnown RBP eCLIP18.15■□□□□ 0.52e-7■■■■□ 20.4
CPNE7-201ENST00000268720 ADGRD2Q7Z7M1 963 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 SMG7Q92540 1137 aaKnown RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 WDR34Q96EX3 536 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 SLC6A16Q9GZN6 736 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ANKRA2Q9H9E1 313 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 CCDC177Q9NQR7 707 aaPredicted RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ZNF282Q9UDV7 671 aaPredicted RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ATP6V1HQ9UI12 483 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 BCHEP06276 602 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ELAVL3Q14576 367 aaKnown RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ZNF605Q86T29 641 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 AMER3Q8N944 861 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 MYDGFQ969H8 173 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 PPCDCQ96CD2 204 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 REPS1Q96D71 796 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 LGR4Q9BXB1 951 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ZCCHC2Q9C0B9 1178 aaKnown RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 BHLHE41Q9C0J9 482 aaPredicted RBP18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ERVK13-1Q9NX77 482 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 ZNF232Q9UNY5 417 aa18.15■□□□□ 0.5
CPNE7-201ENST00000268720 WDFY3Q8IZQ1 3526 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 FOXE1O00358 373 aaPredicted RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 CTDSP2O14595 271 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 TNFRSF21O75509 655 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 PCGF2P35227 344 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 MAPK9P45984 424 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 MXD1Q05195 221 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 TSTQ16762 297 aaKnown RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 KIAA1958Q8N8K9 716 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 TMIEQ8NEW7 156 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 OR52A5Q9H2C5 316 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 CUEDC1Q9NWM3 386 aaPredicted RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 PCDHGA2Q9Y5H1 932 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 TRBC2A0A5B9 178 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 PRR23AA6NEV1 266 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 A8MV72 311 aaPredicted RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 E9PQ18 207 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 SEMA7AO75326 666 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 TBX6O95947 436 aaPredicted RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 RPLP0P05388 317 aaKnown RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 CDK6Q00534 326 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 PTGES3Q15185 160 aaKnown RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 TBCEQ15813 527 aaPredicted RBP18.14■□□□□ 0.49
CPNE7-201ENST00000268720 DEF8Q6ZN54 512 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 USP43Q70EL4 1123 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 METTL4Q8N3J2 472 aa18.14■□□□□ 0.49
CPNE7-201ENST00000268720 CELF2-AS1Q8N7Q2 184 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms