RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ZNF267Q14586 743 aaPredicted RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF605Q86T29 641 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MRPL38Q96DV4 380 aaKnown RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LMLNQ96KR4 655 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ASB16Q96NS5 453 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TSSK3Q96PN8 268 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 BARHL1Q9BZE3 327 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TMEM184CQ9NVA4 438 aa15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TNPO3Q9Y5L0 923 aaKnown RBP15.25■□□□□ 0.03
MAP1LC3B-201ENST00000268607 B4DXG7 233 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LOC730098B7Z3J9 87 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PLD2O14939 933 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GPX5O75715 221 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CYP17A1P05093 508 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 KDELR2P33947 212 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RPS19P39019 145 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MAPK8P45983 427 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ALDH6A1Q02252 535 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TNK1Q13470 666 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CCDC85BQ15834 202 aaPredicted RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LAMTOR1Q6IAA8 161 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SERPINA13PQ6UXR4 307 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TMPRSS11AQ6ZMR5 421 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CREB3L2Q70SY1 520 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 VANGL1Q8TAA9 524 aaPredicted RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 FGF14Q92915 247 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MGLLQ99685 303 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TM9SF2Q99805 663 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GABARAPL3Q9BY60 117 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SLC6A14Q9UN76 642 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 OARD1Q9Y530 152 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 NUP214P35658 2090 aaPredicted RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CIB4A0PJX0 185 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SLC28A1O00337 649 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RFXANKO14593 260 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF197O14709 1029 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HLA-EP13747 358 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CD72P21854 359 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CSNK1DP48730 415 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ITGA1P56199 1179 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RPS14P62263 151 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 OLR1P78380 273 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HOXC5Q00444 222 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 BOP1Q14137 746 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CPSF6Q16630 551 aaKnown RBP eCLIP15.24■□□□□ 0.035e-6■■□□□ 13.1
MAP1LC3B-201ENST00000268607 USP45Q70EL2 814 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ADIPOR2Q86V24 386 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ATCAYQ86WG3 371 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 VRK3Q8IV63 474 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TCTE3Q8IZS6 198 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 UTP15Q8TED0 518 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 POP5Q969H6 163 aaKnown RBP15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 FRMD6Q96NE9 622 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MYADMQ96S97 322 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 FEVQ99581 238 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 COPS8Q99627 209 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CD244Q9BZW8 370 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SFXN1Q9H9B4 322 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 EVA1BQ9NVM1 165 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF226Q9NYT6 803 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CLEC1BQ9P126 229 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RPS6KA6Q9UK32 745 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HS3ST2Q9Y278 367 aa15.24■□□□□ 0.03
MAP1LC3B-201ENST00000268607 A0A075B6Q4 140 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 C1SP09871 688 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 HOXB9P17482 250 aaPredicted RBP15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MADCAM1Q13477 382 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 DMC1Q14565 340 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 RAB30Q15771 203 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 VMACQ2NL98 169 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MLIPQ5VWP3 458 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 PARM1Q6UWI2 310 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MACC1Q6ZN28 852 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 NXPE3Q969Y0 559 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TOE1Q96GM8 510 aaKnown RBP15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MSANTD3Q96H12 275 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 KCNN2Q9H2S1 579 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 C3orf14Q9HBI5 128 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MS4A12Q9NXJ0 267 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SLC25A13Q9UJS0 675 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MAN2B2Q9Y2E5 1009 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MYO10Q9HD67 2058 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SLC9A3R1O14745 358 aaPredicted RBP15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 FHP07954 510 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZNF30P17039 623 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 TACR1P25103 407 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 CSTF2P33240 577 aaKnown RBP eCLIP15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 NSG1P42857 185 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 METAP1P53582 386 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ZXDCQ2QGD7 858 aaPredicted RBP15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 GPR33Q49SQ1 333 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LIX1LQ8IVB5 337 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 B3GNT7Q8NFL0 401 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 OR8H1Q8NGG4 311 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 LHFPL5Q8TAF8 219 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 MARVELD3Q96A59 401 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
MAP1LC3B-201ENST00000268607 ASPNQ9BXN1 380 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms