RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 LRR1Q96L50 414 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF195O14628 629 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 RETP07949 1114 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 MAGEA12P43365 314 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ADPRMQ3LIE5 342 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 BCL2L15Q5TBC7 163 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF691Q5VV52 312 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 KIAA1324Q6UXG2 1013 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TMIGD1Q6UXZ0 262 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ADGRG2Q8IZP9 1017 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 VWA5B2Q8N398 1253 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 SRFBP1Q8NEF9 429 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 NELL2Q99435 816 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TMEM27Q9HBJ8 222 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ADAP2Q9NPF8 381 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 IL26Q9NPH9 171 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 H7C0S8 307 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TSPAN6O43657 245 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TYRP14679 529 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 CD1EP15812 388 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF30P17039 623 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TNFSF8P32971 234 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PITPNAQ00169 270 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 KCNC4Q03721 635 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF234Q14588 700 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 REEP3Q6NUK4 255 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 XKRXQ6PP77 449 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 CHST4Q8NCG5 386 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TSEN15Q8WW01 171 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 OVCA2Q8WZ82 227 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 EGLN2Q96KS0 407 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 CD300AQ9UGN4 299 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 NDOR1Q9UHB4 597 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TAC3Q9UHF0 121 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 URADA6NGE7 173 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 NFATC1O95644 943 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 IFNA6P05013 189 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 GUCA1AP43080 201 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF140P52738 457 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF763Q0D2J5 394 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 LASP1Q14847 261 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 LY6G5CQ5SRR4 150 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PRPF38BQ5VTL8 546 aaKnown RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 OTUD1Q5VV17 481 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-201ENST00000267199 SLC30A6Q6NXT4 461 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 ZNF783Q6ZMS7 281 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 OR5H6Q8NGV6 325 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 APIPQ96GX9 242 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 CCDC115Q96NT0 180 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PIP5K1AQ99755 562 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 BCL7BQ9BQE9 202 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 TCF7L1Q9HCS4 588 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PCDHB11Q9Y5F2 797 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 PCDHA9Q9Y5H5 950 aa11.08□□□□□ -0.64
VPS33A-201ENST00000267199 GLOD5A6NK44 160 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 FGF19O95750 216 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 PLATP00750 562 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SOD2P04179 222 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 HK1P19367 917 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 DRD5P21918 477 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ALAS2P22557 587 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ETV3P41162 512 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 PPP3R1P63098 170 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 PRR5P85299 388 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 CAMK1Q14012 370 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 DOC2AQ14183 400 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TOR1AIP1Q5JTV8 583 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 PLEKHS1Q5SXH7 462 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 FAM86B1Q8N7N1 296 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 UBE2FQ969M7 185 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 RERGQ96A58 199 aaPredicted RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SLCO4A1Q96BD0 722 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SCRN2Q96FV2 425 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 P2RX2Q9UBL9 471 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 MGAT4AQ9UM21 535 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 A0A1B0GVC2 190 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 A6NIN4 97 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ANXA2P2A6NMY6 339 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 MUSKO15146 869 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SCN2BO60939 215 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ADAM23O75077 832 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SEC14L2O76054 403 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ANXA2P07355 339 aaKnown RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 MRPL3P09001 348 aaKnown RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 NT5EP21589 574 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TMEM115Q12893 351 aaPredicted RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 NUDT13Q86X67 352 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 ATP6V1C2Q8NEY4 427 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 OR8J1Q8NGP2 316 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 NUS1Q96E22 293 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TEX37Q96LM6 180 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 SECISBP2Q96T21 854 aaKnown RBP11.07□□□□□ -0.64
VPS33A-201ENST00000267199 OR51I1Q9H343 314 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 TMEM30AQ9NV96 361 aa11.07□□□□□ -0.64
VPS33A-201ENST00000267199 IL36AQ9UHA7 158 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms