RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PRM3Q9NNZ6 103 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 SERHLQ9NQF3 203 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 SLC22A11Q9NSA0 550 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 GPRC5BQ9NZH0 403 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 ZMYM5Q9UJ78 669 aa8.39□□□□□ -1.07
VAPB-201ENST00000265619 NYNRINQ9P2P1 1898 aaKnown RBP8.39□□□□□ -1.07
VAPB-201ENST00000265619 A8MXK9 166 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 UPK3BL1B0FP48 263 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 UPK3BL2E5RIL1 263 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 KPNA5O15131 536 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SLC7A4O43246 635 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 VPS4BO75351 444 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 HLA-DQB1P01920 261 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SCG5P05408 212 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 HMBSP08397 361 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ADRA1BP35368 520 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SELENOPP49908 381 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ZP1P60852 638 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 CDC42EP1Q00587 391 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 FLI1Q01543 452 aaPredicted RBP8.38□□□□□ -1.07
VAPB-201ENST00000265619 HFEQ30201 348 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 MLIPQ5VWP3 458 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 OVCH2Q7RTZ1 564 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 RAB44Q7Z6P3 723 aaPredicted RBP8.38□□□□□ -1.07
VAPB-201ENST00000265619 PGBD3Q8N328 593 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 COQ8AQ8NI60 647 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 MYLPFQ96A32 169 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 NPY6RQ99463 290 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 KATNB1Q9BVA0 655 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 NLGN3Q9NZ94 848 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SHISA3A0PJX4 238 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 LRRC72A6NJI9 287 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 TMEM229AB2RXF0 380 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 FAM227AF5H4B4 570 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 DVL2O14641 736 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SSX5O60225 188 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 TLR5O60602 858 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 TPST2O60704 377 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 PRAMEF1O95521 474 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 HMGN1P05114 100 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 NMBP08949 121 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 PIRTP0C851 137 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 PTPN6P29350 595 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ANGPT1Q15389 498 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SLC6A19Q695T7 634 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 DOK6Q6PKX4 331 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 RANBP10Q6VN20 620 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 OR52E4Q8NGH9 312 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 C2CD4CQ8TF44 421 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 TSPAN17Q96FV3 270 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 POM121Q96HA1 1249 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 OR52E6Q96RD3 313 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SOSTQ9BQB4 213 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 CLEC4MQ9H2X3 399 aaPredicted RBP8.38□□□□□ -1.07
VAPB-201ENST00000265619 OR51B5Q9H339 312 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ARNT2Q9HBZ2 717 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 HYKKA2RU49 373 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 E2F3O00716 465 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 CACNG3O60359 315 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 TSPAN3O60637 253 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SIX6O95475 246 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 NUDT7P0C024 238 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 PRKAR1AP10644 381 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 VIPR1P32241 457 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 RAB14P61106 215 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 OLR1P78380 273 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 GPR33Q49SQ1 333 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 TMEM88Q6PEY1 159 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 GPRIN3Q6ZVF9 776 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 LRRC17Q8N6Y2 441 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SERPINB11Q96P15 392 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ZBTB18Q99592 522 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 FSD1LQ9BXM9 530 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.38□□□□□ -1.072e-9■■■■■ 28.8
VAPB-201ENST00000265619 SLC6A15Q9H2J7 730 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 REEP1Q9H902 201 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 GLOD4Q9HC38 313 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 NUDT15Q9NV35 164 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 LYARQ9NX58 379 aaKnown RBP8.38□□□□□ -1.07
VAPB-201ENST00000265619 CTSFQ9UBX1 484 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 DUSP12Q9UNI6 340 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 SLC22A7Q9Y694 548 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
VAPB-201ENST00000265619 ZNF236Q9UL36 1845 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 APOL3O95236 402 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 ACPPP15309 386 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 HK1P19367 917 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 BPIFB3P59826 476 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SGO1Q5FBB7 561 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 FAM26DQ5JW98 314 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CDKL4Q5MAI5 379 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 VASNQ6EMK4 673 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 RBMS3Q6XE24 437 aaKnown RBP8.37□□□□□ -1.07
VAPB-201ENST00000265619 SVIPQ8NHG7 77 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 SCAMP5Q8TAC9 235 aa8.37□□□□□ -1.07
VAPB-201ENST00000265619 CRELD1Q96HD1 420 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms