RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 BCKDHAP12694 445 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 SRCP12931 536 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ATP1B2P14415 290 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 LIFP15018 202 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 JUNBP17275 347 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 DDX5P17844 614 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PRPS1L1P21108 318 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 EEF1B2P24534 225 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 HRH2P25021 359 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 RPL3P39023 403 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 HNF4AP41235 474 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 HALP42357 657 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 SPINT3P49223 89 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 DGKQP52824 942 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 MTPNP58546 118 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 DCDC1P59894 354 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 EIF2B5Q13144 721 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 FGL2Q14314 439 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 GK3PQ14409 553 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 KIAA0040Q15053 153 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 SYTL3Q4VX76 610 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 RFTN2Q52LD8 501 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 CYBRD1Q53TN4 286 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 SGO1Q5FBB7 561 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PRRT3Q5FWE3 981 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ZC3H12BQ5HYM0 836 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 LDLRAP1Q5SW96 308 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 LRIF1Q5T3J3 769 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ANXA8L1Q5VT79 327 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 FAM46CQ5VWP2 391 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 LRRC66Q68CR7 880 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 GDPD4Q6W3E5 623 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 TMEM26Q6ZUK4 368 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 GPR180Q86V85 440 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 EPHX4Q8IUS5 362 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 RAVER1Q8IY67 606 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ZCCHC7Q8N3Z6 543 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 DTWD1Q8N5C7 304 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 OR10A6Q8NH74 314 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 WDR48Q8TAF3 677 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 FBXO30Q8TB52 745 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 MIPOL1Q8TD10 442 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 FRS2Q8WU20 508 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PMEPA1Q969W9 287 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 TBC1D20Q96BZ9 403 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ISOC1Q96CN7 298 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 REPS1Q96D71 796 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ECHDC3Q96DC8 303 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 REXO5Q96IC2 774 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 CCDC138Q96M89 665 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 SMIM14Q96QK8 99 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 BCL7BQ9BQE9 202 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ZSCAN5AQ9BUG6 496 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 LRRC61Q9BV99 259 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ZCCHC2Q9C0B9 1178 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ZDHHC6Q9H6R6 413 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 CXorf21Q9HAI6 301 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 GPR27Q9NS67 375 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 DCAF13Q9NV06 445 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 FAM120CQ9NX05 1096 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 NFKBIL1Q9UBC1 381 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 APOBEC3BQ9UH17 382 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PNMA8BQ9ULN7 279 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 RUVBL1Q9Y265 456 aaKnown RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 CCL27Q9Y4X3 112 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PCDHGA11Q9Y5H2 935 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PRSS21Q9Y6M0 314 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 CSNK1G3Q9Y6M4 447 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 HSPE1-MOB4S4R3N1 261 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 PCM1Q15154 2024 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 ARHGEF17Q96PE2 2063 aaPredicted RBP6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 MED13LQ71F56 2210 aa6.72□□□□□ -1.33
SMARCE1-201ENST00000264640 K7ERQ8 282 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 RFXANKO14593 260 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 DUX1O43812 170 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 MRPS14O60783 128 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 CREG1O75629 220 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 SNAP29O95721 258 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 CLDN1O95832 211 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 PDYNP01213 254 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 IL2RAP01589 272 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 ALPLP05186 524 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 CTSLP07711 333 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 GSTM1P09488 218 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 FURINP09958 794 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 DCKP27707 260 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 GRNP28799 593 aaKnown RBP6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 CCKBRP32239 447 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 HPCAL1P37235 193 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 KIR3DL1P43629 444 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 SLC6A12P48065 614 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 TMBIM6P55061 237 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 PHEXP78562 749 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 HPCAP84074 193 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 HMGCS1Q01581 520 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 IRF8Q02556 426 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 GSTM4Q03013 218 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 GBX1Q14549 363 aa6.71□□□□□ -1.34
SMARCE1-201ENST00000264640 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms