RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 IKBIPQ70UQ0 350 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 TRIM69Q86WT6 500 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.57■□□□□ 0.08
CTCF-201ENST00000264010 WDR48Q8TAF3 677 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 PRAP1Q96NZ9 151 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 KCNC2Q96PR1 638 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 DZANK1Q9NVP4 752 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 ABCG2Q9UNQ0 655 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 POFUT2Q9Y2G5 429 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 TRBC2A0A5B9 178 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 MSL3P1P0C860 447 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 SEC13P55735 322 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 RAPSNQ13702 412 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 PLET1Q6UQ28 207 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 CEACAM20Q6UY09 585 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 RFPL4BQ6ZWI9 263 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 IGFN1Q86VF2 1251 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 P2RY8Q86VZ1 359 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 TEFMQ96QE5 360 aaKnown RBP15.57■□□□□ 0.08
CTCF-201ENST00000264010 MYNNQ9NPC7 610 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 SLC6A13Q9NSD5 602 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 ZNF639Q9UID6 485 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 ACSL6Q9UKU0 697 aa15.57■□□□□ 0.08
CTCF-201ENST00000264010 SERTM1A2A2V5 107 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 MOSPD3O75425 235 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 TCF3P15923 654 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 NPPBP16860 134 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 VBP1P61758 197 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 MVKQ03426 396 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 DEF8Q6ZN54 512 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 VASH1Q7L8A9 365 aaPredicted RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 FBXO15Q8NCQ5 510 aaPredicted RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 SRFBP1Q8NEF9 429 aaKnown RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 CHCHD6Q9BRQ6 235 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 NEUROD4Q9HD90 331 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 SEMA3GQ9NS98 782 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 MSRAQ9UJ68 235 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 PRRT4C9JH25 899 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 OR10H3O60404 316 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 PAK4O96013 591 aaPredicted RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 ADH1BP00325 375 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 CA3P07451 260 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 ITGAMP11215 1152 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 PPP2R2BQ00005 443 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 CDK5R2Q13319 367 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 FXNQ16595 210 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 ZNF776Q68DI1 518 aaPredicted RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 LMNTD1Q8N9Z9 388 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 RASSF5Q8WWW0 418 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 OR5P2Q8WZ92 322 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 GDE1Q9NZC3 331 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 H3BMQ9 156 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 ADAM23O75077 832 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 ATE1O95260 518 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 RYKP34925 604 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 ITGA1P56199 1179 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 RPP38P78345 283 aaKnown RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 MC1RQ01726 317 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 RHAGQ02094 409 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 NPRL3Q12980 569 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 ANGPT1Q15389 498 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 PGBD3Q8N328 593 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 COG8Q96MW5 612 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 F2RL3Q96RI0 385 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 SAV1Q9H4B6 383 aaPredicted RBP15.56■□□□□ 0.08
CTCF-201ENST00000264010 INIPQ9NRY2 104 aa15.56■□□□□ 0.08
CTCF-201ENST00000264010 A0A0G2JN53 185 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 OPRL1P41146 370 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 UGT2B15P54855 530 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 QPRTQ15274 297 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 NKG7Q16617 165 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 TMEM52BQ4KMG9 183 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 C9orf64Q5T6V5 341 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 ZNF691Q5VV52 312 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 REEP3Q6NUK4 255 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 SPARTQ8N0X7 666 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 VN1R2Q8NFZ6 395 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 GTPBP3Q969Y2 492 aaKnown RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 KCNS3Q9BQ31 491 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 MRPS30Q9NP92 439 aaKnown RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 KLHL28Q9NXS3 571 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 KCNK6Q9Y257 313 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 COL4A4P53420 1690 aaPredicted RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 K7ESM1 405 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 MID1O15344 667 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 AQP9O43315 295 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 TIE1P35590 1138 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 OR1E2P47887 323 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 PYCR3Q53H96 274 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 TSPYL5Q86VY4 417 aaPredicted RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 LILRB4Q8NHJ6 448 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 VANGL1Q8TAA9 524 aaPredicted RBP15.55■□□□□ 0.08
CTCF-201ENST00000264010 OR4K3Q96R72 315 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 PELI2Q9HAT8 420 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 UTS2RQ9UKP6 389 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 UGT2A1Q9Y4X1 527 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 NUDT7P0C024 238 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 AGXTP21549 392 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 SELENOWP63302 87 aa15.55■□□□□ 0.08
CTCF-201ENST00000264010 LGALS3BPQ08380 585 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms