RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAM214AQ32MH5 1076 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 TOR2AQ5JU69 321 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 RGMBQ6NW40 437 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 GLB1LQ6UWU2 654 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 LINGO4Q6UY18 593 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 TMC8Q8IU68 726 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 ADGRG2Q8IZP9 1017 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 CLP1Q92989 425 aaKnown RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 C1GALT1C1Q96EU7 318 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 ZBED6CLQ96FA7 236 aaPredicted RBP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM43Q9BTV4 400 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 KATNB1Q9BVA0 655 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 NARFLQ9H6Q4 476 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 C1GALT1Q9NS00 363 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 MAT2BQ9NZL9 334 aa11.83□□□□□ -0.52
CHMP2B-201ENST00000263780 PRAMEF33A0A0G2JMD5 474 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 SNTNA6NMZ2 147 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 UPK3BL1B0FP48 263 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 UPK3BL2E5RIL1 263 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 FAAHO00519 579 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PRAMEF10O60809 474 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CD160O95971 181 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CLEC2LP0C7M8 214 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 IFI30P13284 250 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CHI3L1P36222 383 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 ABATP80404 500 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 EEF1A2Q05639 463 aaKnown RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 C3orf38Q5JPI3 329 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 COX20Q5RI15 118 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PLEKHS1Q5SXH7 462 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CNIH2Q6PI25 160 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 FAM26EQ8N5C1 309 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 SEPT5Q99719 369 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PIGUQ9H490 435 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 REEP4Q9H6H4 257 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 SPIN1Q9Y657 262 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CLCA3PQ9Y6N3 262 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 GREB1Q4ZG55 1949 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 GNG14A0A1W2PPG7 69 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 AGAP14A8MT82 685 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 H3BN98 237 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 GFYI3L273 518 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 BTN3A3O00478 584 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PRAMEF4O60810 478 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 OR7A10O76100 309 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CLDN7O95471 211 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 FAM157BP0CG42 384 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 ARAFP10398 606 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 APEX1P27695 318 aaKnown RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 FGF9P31371 208 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 WNT4P56705 351 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PCBP3P57721 371 aaKnown RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 TPBGQ13641 420 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 DDX39BQ13838 428 aaKnown RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 CRTC2Q53ET0 693 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 DCST1Q5T197 706 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PRAMEF9Q5VWM5 478 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 GRHL2Q6ISB3 625 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 DNAJB7Q7Z6W7 309 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 C9orf62Q8N4C0 152 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 TTC9BQ8N6N2 239 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 LRRC17Q8N6Y2 441 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 UFD1Q92890 307 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 GPR137Q96N19 417 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 TAS2R7Q9NYW3 318 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 COMMD3Q9UBI1 195 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC23A1Q9UHI7 598 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 ELF5Q9UKW6 265 aaPredicted RBP11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 KCNE2Q9Y6J6 123 aa11.82□□□□□ -0.52
CHMP2B-201ENST00000263780 PIPSLA2A3N6 862 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 C2orf78A6NCI8 922 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 CDK2AP1O14519 115 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SMAD6O43541 496 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SLC19A2O60779 497 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TIA1P31483 386 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 PTGS2P35354 604 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 EVX1P49640 407 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 PNLIPRP1P54315 467 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 PER3P56645 1201 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 IL18Q14116 193 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ZXDCQ2QGD7 858 aaPredicted RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 KLHL12Q53G59 568 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 ADGRF1Q5T601 910 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SDE2Q6IQ49 451 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 CXorf57Q6NSI4 855 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 QSOX2Q6ZRP7 698 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 PDZD3Q86UT5 571 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 SERINC5Q86VE9 423 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TCEANCQ8N8B7 351 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 TMEM145Q8NBT3 493 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 KCNJ15Q99712 375 aa11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 POLR2J3Q9H1A7 115 aaKnown RBP11.81□□□□□ -0.52
CHMP2B-201ENST00000263780 GPATCH2Q9NW75 528 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms