RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 C16orf78Q8WTQ4 265 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 SLC7A6Q92536 515 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 RIOK2Q9BVS4 552 aaKnown RBP16.64■□□□□ 0.25
TRAM1-201ENST00000262213 RPRD1BQ9NQG5 326 aaKnown RBP16.64■□□□□ 0.25
TRAM1-201ENST00000262213 KCNE2Q9Y6J6 123 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 MAU2Q9Y6X3 613 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 CENPBD1B2RD01 187 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 C5orf58C9J3I9 102 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 CATP04040 527 aaKnown RBP16.64■□□□□ 0.25
TRAM1-201ENST00000262213 FURINP09958 794 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 MYL9P24844 172 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 RHAGQ02094 409 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 ZNF630Q2M218 657 aaPredicted RBP16.64■□□□□ 0.25
TRAM1-201ENST00000262213 ABI3BPQ7Z7G0 1075 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 TRIM69Q86WT6 500 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 MEX3DQ86XN8 651 aaKnown RBP16.64■□□□□ 0.25
TRAM1-201ENST00000262213 NPAS4Q8IUM7 802 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 SLC25A19Q9HC21 320 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 ATP6V1HQ9UI12 483 aa16.64■□□□□ 0.25
TRAM1-201ENST00000262213 OR6C70A6NIJ9 312 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 TLX2O43763 284 aaPredicted RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 GPR37L1O60883 481 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 CPNE3O75131 537 aaKnown RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 IL3P08700 152 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 CSF3P09919 207 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 HSD3B1P14060 373 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 HSD3B2P26439 372 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 XKP51811 444 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 PTPN5P54829 565 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 DSTNP60981 165 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 RBBP4Q09028 425 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 CAMK2BQ13554 666 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 GPAT3Q53EU6 434 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 CRB2Q5IJ48 1285 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 PPP2R2DQ66LE6 453 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 CEACAM20Q6UY09 585 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 RNF180Q86T96 592 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 SYT14Q8NB59 555 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 ZNF740Q8NDX6 193 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 SLC6A18Q96N87 628 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 MND1Q9BWT6 205 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 MIXL1Q9H2W2 232 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 RC3H2Q9HBD1 1191 aaKnown RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 ENOPH1Q9UHY7 261 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 LAMA2P24043 3122 aaKnown RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 ANKDD1BA6NHY2 528 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 OSMP13725 252 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 OPRD1P41143 372 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 GALK2Q01415 458 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 ATAT1Q5SQI0 421 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 ZNF770Q6IQ21 691 aaPredicted RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 Q6ZNB5 142 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 PHC2Q8IXK0 858 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 WFDC6Q9BQY6 131 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 POLR2J3Q9H1A7 115 aaKnown RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 SPNS1Q9H2V7 528 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 TMEM38AQ9H6F2 299 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 MIEF1Q9NQG6 463 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 TXNL4BQ9NX01 149 aaKnown RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 LSM7Q9UK45 103 aaKnown RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 SPIN1Q9Y657 262 aaPredicted RBP16.63■□□□□ 0.25
TRAM1-201ENST00000262213 DOCK6Q96HP0 2047 aa16.63■□□□□ 0.25
TRAM1-201ENST00000262213 A0A0B4J293 547 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 ZNF197O14709 1029 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 PSIP1O75475 530 aaKnown RBP16.62■□□□□ 0.25
TRAM1-201ENST00000262213 ARAFP10398 606 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SDC2P34741 201 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 GSTM5P46439 218 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 ALDH9A1P49189 494 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 HMGA2P52926 109 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 TARDBPQ13148 414 aaKnown RBP eCLIP16.62■□□□□ 0.25
TRAM1-201ENST00000262213 CLPPQ16740 277 aaPredicted RBP16.62■□□□□ 0.25
TRAM1-201ENST00000262213 LYPD8Q6UX82 237 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SLCO4C1Q6ZQN7 724 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SZRD1Q7Z422 152 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 RNF31Q96EP0 1072 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 CTPS2Q9NRF8 586 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 C5AR2Q9P296 337 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 REV1Q9UBZ9 1251 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 HYKKA2RU49 373 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 B4DXG7 233 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SLCO2B1O94956 709 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 CHRNB1P11230 501 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 CA8P35219 290 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 TBPL1P62380 186 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 C1DQ13901 141 aaKnown RBP16.62■□□□□ 0.25
TRAM1-201ENST00000262213 DCST1Q5T197 706 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SYCE2Q6PIF2 218 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 OLIG3Q7RTU3 272 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 ZFP41Q8N8Y5 198 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 ENKURQ8TC29 256 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 ECHDC3Q96DC8 303 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 C1GALT1C1Q96EU7 318 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 CITED4Q96RK1 184 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 NELL2Q99435 816 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 SLC6A16Q9GZN6 736 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 CXorf36Q9H7Y0 433 aa16.62■□□□□ 0.25
TRAM1-201ENST00000262213 GPBP1L1Q9HC44 474 aaPredicted RBP16.62■□□□□ 0.25
TRAM1-201ENST00000262213 GIMAP4Q9NUV9 329 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms