RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 RTP2Q5QGT7 225 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 SFRP4Q6FHJ7 346 aaPredicted RBP12.48□□□□□ -0.41
TMEM260-201ENST00000261556 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 ATOH1Q92858 354 aaPredicted RBP12.48□□□□□ -0.41
TMEM260-201ENST00000261556 DNASE1L2Q92874 299 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 TMED9Q9BVK6 235 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 SAP130Q9H0E3 1048 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 GLOD4Q9HC38 313 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 COMMD9Q9P000 198 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 NDRG2Q9UN36 371 aaKnown RBP12.48□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF487B1APH4 448 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 ADAMDEC1O15204 470 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 MFSD11O43934 449 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 CCNB2O95067 398 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 EDN3P14138 238 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 RPS19P39019 145 aaKnown RBP12.48□□□□□ -0.41
TMEM260-201ENST00000261556 MAGEA12P43365 314 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 ALG11Q2TAA5 492 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 SYPL2Q5VXT5 272 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 MARCH9Q86YJ5 346 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 NPAS4Q8IUM7 802 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF567Q8N184 647 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 NKAPQ8N5F7 415 aaKnown RBP12.48□□□□□ -0.41
TMEM260-201ENST00000261556 SFT2D1Q8WV19 159 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 RFT1Q96AA3 541 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 COPS8Q99627 209 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 RPS6KA6Q9UK32 745 aa12.48□□□□□ -0.41
TMEM260-201ENST00000261556 MYO7AQ13402 2215 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 UBFD1O14562 309 aaKnown RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 ANKRD28O15084 1053 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 TRIM3O75382 744 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 GRK5P34947 590 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 WASP42768 502 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 PYCR3Q53H96 274 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 HACD2Q6Y1H2 254 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 YIPF5Q969M3 257 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 OR5M11Q96RB7 305 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 SUCNR1Q9BXA5 334 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 POT1Q9NUX5 634 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 GFOD1Q9NXC2 390 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 FKBP7Q9Y680 259 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 MN1Q10571 1320 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CLCA1A8K7I4 914 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CDC7O00311 574 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CCL16O15467 120 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 PIGRP01833 764 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 FPR3P25089 353 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 GPR15P49685 360 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 MLLT1Q03111 559 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 LRRC37A5PQ49AS3 106 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 TIGD5Q53EQ6 642 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 LINGO4Q6UY18 593 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 TSSK3Q96PN8 268 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CDK15Q96Q40 435 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 KCTD15Q96SI1 283 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 DDOQ99489 341 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 TCEAL7Q9BRU2 100 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 MYEF2Q9P2K5 600 aaKnown RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CHD4Q14839 1912 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 FAM208AQ9UK61 1670 aaKnown RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 FAM74A7A6NL05 159 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 RPN2P04844 631 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 H2AFB2P0C5Z0 115 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 ACPPP15309 386 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 UGT2B10P36537 528 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CASP9P55211 416 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 GINS1Q14691 196 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 FAM187BQ17R55 369 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 OLFML2AQ68BL7 652 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 RELL2Q8NC24 303 aaPredicted RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 RPLP0P6Q8NHW5 317 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 SLC38A3Q99624 504 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.47□□□□□ -0.41
TMEM260-201ENST00000261556 ASF1BQ9NVP2 202 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 UTS2RQ9UKP6 389 aa12.47□□□□□ -0.41
TMEM260-201ENST00000261556 YJEFN3A6XGL0 299 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 SLC25A14O95258 325 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 ITGA3P26006 1051 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 RYKP34925 604 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 RFX2P48378 723 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 CLCN5P51795 746 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 XKP51811 444 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 PDZK1IP1Q13113 114 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 OTUD1Q5VV17 481 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 SLC6A19Q695T7 634 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 NAA40Q86UY6 237 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 TSPYL5Q86VY4 417 aaPredicted RBP12.46□□□□□ -0.41
TMEM260-201ENST00000261556 OR7D4Q8NG98 312 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 OR4M1Q8NGD0 313 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 ZDHHC1Q8WTX9 485 aa12.46□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms