RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 RPS25P62851 125 aaKnown RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 C2orf80Q0P641 193 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 ASAH1Q13510 395 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 C1DQ13901 141 aaKnown RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 IL18Q14116 193 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 INSL4Q14641 139 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 LAS2Q8IYD9 372 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OR7G3Q8NG95 312 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OR4M1Q8NGD0 313 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OR52P1PQ8NH57 321 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OTUB1Q96FW1 271 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 TRIM45Q9H8W5 580 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 PLEKHB1Q9UF11 243 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 LSM2Q9Y333 95 aaKnown RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 PLXNA3P51805 1871 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OR6C75A6NL08 312 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 ARHGEF15O94989 841 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 C8GP07360 202 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 CYP2A6P11509 494 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 ETV5P41161 510 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 CTSOP43234 321 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 ETV1P50549 477 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 AP1S1P61966 158 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 TARDBPQ13148 414 aaKnown RBP eCLIP15.17■□□□□ 0.022e-7■■■□□ 18.4
LMNB1-201ENST00000261366 CDKN3Q16667 212 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 GPR33Q49SQ1 333 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 DDI2Q5TDH0 399 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 SLC24A5Q71RS6 500 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 TRIM69Q86WT6 500 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 RDH10Q8IZV5 341 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 Q8N402 240 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 C2orf73Q8N5S3 287 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 SLC25A46Q96AG3 418 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OR4K3Q96R72 315 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 MND1Q9BWT6 205 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 STMN3Q9NZ72 180 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 ENPP4Q9Y6X5 453 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 XIRP2A4UGR9 3374 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 A0A1B0GVC2 190 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 A6NIN4 97 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 ARHGEF33A8MVX0 844 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SYN3O14994 580 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 HPGDSO60760 199 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 BCHEP06276 602 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 PXNP49023 591 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-201ENST00000261366 XKP51811 444 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 PUM1Q14671 1186 aaKnown RBP eCLIP15.16■□□□□ 0.028e-9■□□□□ 9.1
LMNB1-201ENST00000261366 ANXA8L1Q5VT79 327 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 CHST9Q7L1S5 443 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 TMC8Q8IU68 726 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 CPA6Q8N4T0 437 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 WDR48Q8TAF3 677 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 RASSF5Q8WWW0 418 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SPATA6Q9NWH7 488 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-201ENST00000261366 CORO2BQ9UQ03 480 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 GPR52Q9Y2T5 361 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SH3D21A4FU49 640 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SLC35F4A4IF30 521 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SLC16A8O95907 504 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF8P17098 575 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-201ENST00000261366 OPRD1P41143 372 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 GSTM5P46439 218 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 INPP1P49441 399 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 HNMTP50135 292 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 PTSQ03393 145 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 PRSS53Q2L4Q9 553 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 WSCD2Q2TBF2 565 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 POM121L1PQ3SYA9 428 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SPDYE7PQ495Y7 208 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 LCN1P1Q5VSP4 162 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 XKRXQ6PP77 449 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 AGTRAPQ6RW13 159 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 PHF21AQ96BD5 680 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 OMA1Q96E52 524 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 CCDC120Q96HB5 630 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 MED30Q96HR3 178 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 SMAD5Q99717 465 aaKnown RBP15.16■□□□□ 0.02
LMNB1-201ENST00000261366 WRAP53Q9BUR4 548 aaKnown RBP15.16■□□□□ 0.02
LMNB1-201ENST00000261366 POLR2J3Q9H1A7 115 aaKnown RBP15.16■□□□□ 0.02
LMNB1-201ENST00000261366 C5AR2Q9P296 337 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 BTNL2Q9UIR0 455 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 TRPM7Q96QT4 1865 aa15.16■□□□□ 0.02
LMNB1-201ENST00000261366 POLR1CO15160 346 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 PRMT3O60678 531 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ENDOUP21128 410 aaKnown RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 PPIBP23284 216 aaKnown RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 EVI2BP34910 448 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 MAP2K3P46734 347 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 SLC11A1P49279 550 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ATN1P54259 1190 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 TAS2R50P59544 299 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 RHAGQ02094 409 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 DBPQ10586 325 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 LRRC32Q14392 662 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 MPEG1Q2M385 716 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 FLYWCH1Q4VC44 716 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF57Q68EA5 555 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-201ENST00000261366 OR8H1Q8NGG4 311 aa15.15■□□□□ 0.02
LMNB1-201ENST00000261366 ZFAND1Q8TCF1 268 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms