RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MAP7Q14244 749 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 MLIPQ5VWP3 458 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 SLC48A1Q6P1K1 146 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 MRPL14Q6P1L8 145 aaKnown RBP14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 TICAM1Q8IUC6 712 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 PRSS58Q8IYP2 241 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 ESX1Q8N693 406 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 OR7A2PQ8NGA2 310 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 DNAJB14Q8TBM8 379 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 STT3BQ8TCJ2 826 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 FKBP10Q96AY3 582 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 NXPE2Q96DL1 559 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 SLC26A1Q9H2B4 701 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 WDR41Q9HAD4 459 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 MIEF1Q9NQG6 463 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 ACSL6Q9UKU0 697 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 CES1P1Q9UKY3 287 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 NEUROG3Q9Y4Z2 214 aa14.88□□□□□ -0.03
CCDC90B-201ENST00000260054 VSTM2BA6NLU5 285 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 RAD1O60671 282 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 PRMT3O60678 531 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 ALBP02768 609 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 ZGLP1P0C6A0 271 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CCNYL3P0C7X3 344 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 PCSK2P16519 638 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CD82P27701 267 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 HPCAL1P37235 193 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 EFNA3P52797 238 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 OCA2Q04671 838 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 NKG7Q16617 165 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 ZNF385BQ569K4 471 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 FAM180BQ6P0A1 224 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 SHISA6Q6ZSJ9 500 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 MED25Q71SY5 747 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 LAPTM4BQ86VI4 370 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 FUNDC1Q8IVP5 155 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 NLGN4XQ8N0W4 816 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 NLGN4YQ8NFZ3 816 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 TGIF2Q9GZN2 237 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CLMPQ9H6B4 373 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 THSD1Q9NS62 852 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CCDC167Q9P0B6 97 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 ATP6V1HQ9UI12 483 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 SCN2AQ99250 2005 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 FREM2Q5SZK8 3169 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 AKAP13Q12802 2813 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 A0A1W2PS29 197 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 LDB3O75112 727 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 DCTN3O75935 186 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 COX7A2P14406 83 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 IL10P22301 178 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 BTG2P78543 158 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 KLF10Q13118 480 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 NCF4Q15080 339 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 AGKQ53H12 422 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 OR52E8Q6IFG1 317 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 DTX1Q86Y01 620 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 ZNF595Q8IYB9 648 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CT55Q8WUE5 264 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 TESCQ96BS2 214 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 MIEF2Q96C03 454 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 PPCDCQ96CD2 204 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 MTERF3Q96E29 417 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 LRRC37BQ96QE4 947 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 SPSB2Q99619 263 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CCDC106Q9BWC9 280 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 RASSF4Q9H2L5 321 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 SOX17Q9H6I2 414 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 EHD3Q9NZN3 535 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 MRPS33Q9Y291 106 aaKnown RBP14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 MSRB2Q9Y3D2 182 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 CLDN16Q9Y5I7 305 aa14.87□□□□□ -0.03
CCDC90B-201ENST00000260054 C9J4A7 227 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 FGF17O60258 216 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 TBX19O60806 448 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 ADRB1P08588 477 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 LAMP1P11279 417 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 TCN2P20062 427 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 PIK3R1P27986 724 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 STAT5AP42229 794 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 CLNS1AP54105 237 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 ACTN3Q08043 901 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 MPEG1Q2M385 716 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 FAM174BQ3ZCQ3 159 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 MINDY4Q4G0A6 757 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 SPANXN4Q5MJ08 99 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 FAM69BQ5VUD6 431 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 CAMKMTQ7Z624 323 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 SCUBE1Q8IWY4 988 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 OR4N5Q8IXE1 308 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 TANKQ92844 425 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 EXOSC8Q96B26 276 aaKnown RBP14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 ANKRD9Q96BM1 317 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 ZNF764Q96H86 408 aaPredicted RBP14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 PRDM9Q9NQV7 894 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 PRTFDC1Q9NRG1 225 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 C14orf105Q9NVL8 296 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 TAS2R7Q9NYW3 318 aa14.86□□□□□ -0.03
CCDC90B-201ENST00000260054 SH3BP4Q9P0V3 963 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms