RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 LRR1Q96L50 414 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC38A2Q96QD8 506 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 BCL7BQ9BQE9 202 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 YIPF2Q9BWQ6 316 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC6A16Q9GZN6 736 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ELAC1Q9H777 363 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 TRIM45Q9H8W5 580 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 TRPV5Q9NQA5 729 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 KLHL28Q9NXS3 571 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CLEC2DQ9UHP7 191 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CCL26Q9Y258 94 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CARD8Q9Y2G2 431 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PCDHGA4Q9Y5G9 962 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TRBV23OR9-2A0A075B6M9 112 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 OR6C70A6NIJ9 312 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ANHXE9PGG2 379 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 HAT1O14929 419 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PRAMEF4O60810 478 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CPNE3O75131 537 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 FGBP02675 491 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ZNF30P17039 623 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CD22P20273 847 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 IMPA1P29218 277 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 NOS3P29474 1203 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 HOXA9P31269 272 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PIK3CBP42338 1070 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CCT3P49368 545 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 VASPP50552 380 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 RNF144AP50876 292 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 KCNJ10P78508 379 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 DUSP7Q16829 419 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ZNF385BQ569K4 471 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PRAMEF9Q5VWM5 478 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 LAIR1Q6GTX8 287 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GALNT13Q8IUC8 556 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 MFSD4AQ8N468 514 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 OR5D16Q8NGK9 328 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 OR9A1PQ8NGU1 263 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 DOK4Q8TEW6 326 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GATAD2BQ8WXI9 593 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TFGQ92734 400 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 TMEM80Q96HE8 168 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 QRFPRQ96P65 431 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FERD3LQ96RJ6 166 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 MACROD1Q9BQ69 325 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 C17orf62Q9BQA9 187 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TMEM246Q9BRR3 403 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC46A2Q9BY10 475 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SP140LQ9H930 580 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TMEM184CQ9NVA4 438 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 IL36AQ9UHA7 158 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SNX7Q9UNH6 387 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 MRPS23Q9Y3D9 190 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 SIP14410 1827 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TRBV4-1A0A0J9YWV2 114 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 TMEM221A6NGB7 291 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC16A5O15375 505 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 YY2O15391 372 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FRS3O43559 492 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 LATO43561 262 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PTTG1O95997 202 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CCNYL3P0C7X3 344 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 IFI30P13284 250 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SPNP16150 400 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 JUNDP17535 347 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 RHCEP18577 417 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CELP19835 753 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CXCR2P25025 360 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ANXA11P50995 505 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 NCBP2P52298 156 aaKnown RBP eCLIP4.53□□□□□ -1.68
USP44-201ENST00000258499 CAV3P56539 151 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 NTHL1P78549 312 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CAP1Q01518 475 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FADDQ13158 208 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SELENBP1Q13228 472 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FAM26DQ5JW98 314 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PLAG1Q6DJT9 500 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SYCE2Q6PIF2 218 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 MSANTD1Q6ZTZ1 278 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ASB18Q6ZVZ8 466 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ARMCX6Q7L4S7 300 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 C6orf120Q7Z4R8 191 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 MMAAQ8IVH4 418 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 FAM20CQ8IXL6 584 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 IRF7Q92985 503 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ZBED6CLQ96FA7 236 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 ZNF486Q96H40 463 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC35G5Q96KT7 338 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FCRL4Q96PJ5 515 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 XKR8Q9H6D3 395 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ANKRA2Q9H9E1 313 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 MOV10Q9HCE1 1003 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 ANKHQ9HCJ1 492 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FBXO8Q9NRD0 319 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TDP1Q9NUW8 608 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 NUFIP1Q9UHK0 495 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 BTNL2Q9UIR0 455 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ZNF232Q9UNY5 417 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 A0A1W2PQL4 384 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms