RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 AGR3Q8TD06 166 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 CCDC115Q96NT0 180 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 OR2M2Q96R28 347 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 SLC38A3Q99624 504 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 TRMOQ9BU70 441 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 TNKS2Q9H2K2 1166 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 CRISPLD1Q9H336 500 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 PRMT8Q9NR22 394 aaPredicted RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 EIF2B3Q9NR50 452 aaKnown RBP11.33□□□□□ -0.6
CCNA1-201ENST00000255465 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 BTRCQ9Y297 605 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 NME7Q9Y5B8 376 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 DENND4CQ5VZ89 1909 aa11.33□□□□□ -0.6
CCNA1-201ENST00000255465 D6RAR5 112 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SGK494L7N484 410 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 PPP6CO00743 305 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 GPR37O15354 613 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 CCL16O15467 120 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 BRINP1O60477 761 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 POP7O75817 140 aaKnown RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 LTFP02788 710 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 LCP1P13796 627 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 FSHRP23945 695 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 FMO3P31513 532 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ASPAP45381 313 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 RGS6P49758 472 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 HNMTP50135 292 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 NAGLUP54802 743 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SLC25A11Q02978 314 aaKnown RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF252P-AS1Q0IIN9 211 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SYT16Q17RD7 645 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 MPEG1Q2M385 716 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 KLHL22Q53GT1 634 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 PPM1JQ5JR12 505 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 DNLZQ5SXM8 178 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 C3P1Q6ZMU1 363 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF534Q76KX8 674 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 COMTD1Q86VU5 262 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 FUNDC1Q8IVP5 155 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 TTC9BQ8N6N2 239 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 CEP76Q8TAP6 659 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SCARB1Q8WTV0 552 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 AGAP2Q99490 1192 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 PKMYT1Q99640 499 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 PITX2Q99697 317 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 INPP5KQ9BT40 448 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 GPR61Q9BZJ8 451 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 HCN3Q9P1Z3 774 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 INSL5Q9Y5Q6 135 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF638Q14966 1978 aaKnown RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 A0A0J9YYE9 177 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 C9orf170A2RU37 121 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 CBX7O95931 251 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 APRTP07741 180 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 NMBP08949 121 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 GJA1P17302 382 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 HSPA7P48741 367 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 MAP4K2Q12851 820 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF155Q12901 538 aaPredicted RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ECH1Q13011 328 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 TRIQKQ629K1 86 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 FAM131AQ6UXB0 335 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 CHMP1BQ7LBR1 199 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 TRIM69Q86WT6 500 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 PLD6Q8N2A8 252 aaKnown RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 GPR151Q8TDV0 419 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 CREB3L4Q8TEY5 395 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SLC22A18Q96BI1 424 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 PFDN5Q99471 154 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SEPHS2Q99611 448 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SSX3Q99909 188 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 BCO2Q9BYV7 579 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 NIF3L1Q9GZT8 377 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 POMKQ9H5K3 350 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 GORASP2Q9H8Y8 452 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 SMURF2Q9HAU4 748 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 TMEFF2Q9UIK5 374 aaPredicted RBP11.32□□□□□ -0.6
CCNA1-201ENST00000255465 POMT2Q9UKY4 750 aa11.32□□□□□ -0.6
CCNA1-201ENST00000255465 NCOR1O75376 2440 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 MYBPHLA2RUH7 354 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 FAM74A7A6NL05 159 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ARHGEF33A8MVX0 844 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms