RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MS4A4AQ96JQ5 239 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 HSFX1Q9UBD0 423 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 RHCGQ9UBD6 479 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 PCTPQ9UKL6 214 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 RNF6Q9Y252 685 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 S100A9P06702 114 aaKnown RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PSKH1P11801 424 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 HOXD8P13378 290 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 CD68P34810 354 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 ADAM15Q13444 863 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PLXDC1Q8IUK5 500 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 JAGN1Q8N5M9 183 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PHOSPHO2Q8TCD6 241 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 FUBP1Q96AE4 644 aaKnown RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 NXPE2Q96DL1 559 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF778Q96MU6 729 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 TGM7Q96PF1 710 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PORP16435 677 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 CDH15P55291 814 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 UGT3A2Q3SY77 523 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PLEKHG7Q6ZR37 379 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 TMEM174Q8WUU8 243 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 FBXO9Q9UK97 447 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PADI2Q9Y2J8 665 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 CDH10Q9Y6N8 788 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PROM1O43490 865 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 OR2B3O76000 313 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 OXSR1O95747 527 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 GDI2P50395 445 aaKnown RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PUDPQ08623 228 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 CHAF1BQ13112 559 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 CLCA4Q14CN2 919 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 RAB6CQ53S08 254 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 C6orf120Q7Z4R8 191 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 ISCA2Q86U28 154 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 SH3YL1Q96HL8 342 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 ERMAPQ96PL5 475 aaPredicted RBP18.18■□□□□ 0.5
PTPRE-201ENST00000254667 RAB6CQ9H0N0 254 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 UGDHO60701 494 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 DRD1P21728 446 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PLCXD2Q0VAA5 305 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 PMS2P3Q13401 168 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 UTS2BQ765I0 119 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 TSPAN33Q86UF1 283 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 OR2T33Q8NG76 320 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 OR5L2Q8NGL0 311 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 OR56A3Q8NH54 315 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 TAMM41Q96BW9 452 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 KLF15Q9UIH9 416 aa18.18■□□□□ 0.5
PTPRE-201ENST00000254667 HCRTR2O43614 444 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 DNAJB5O75953 348 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 OR1E2P47887 323 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 C1orf61Q13536 156 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 TCTE1Q5JU00 501 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 TTC9BQ8N6N2 239 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 FBXL20Q96IG2 436 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 DNAJC27Q9NZQ0 273 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 KIF13AQ9H1H9 1805 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 FARS2O95363 451 aaKnown RBP18.17■□□□□ 0.5
PTPRE-201ENST00000254667 RBM34P42696 430 aaKnown RBP18.17■□□□□ 0.5
PTPRE-201ENST00000254667 TRAM1Q15629 374 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 GRHL2Q6ISB3 625 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 TRMT2BQ96GJ1 504 aaKnown RBP18.17■□□□□ 0.5
PTPRE-201ENST00000254667 RHCEP18577 417 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 ACTC1P68032 377 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 ACTA1P68133 377 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 ADAM17P78536 824 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 SLC15A3Q8IY34 581 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 CHST14Q8NCH0 376 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 KLF16Q9BXK1 252 aaPredicted RBP18.17■□□□□ 0.5
PTPRE-201ENST00000254667 IL17CQ9P0M4 197 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 MKLN1Q9UL63 735 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 H0YJX3 145 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 SNNO75324 88 aaPredicted RBP18.17■□□□□ 0.5
PTPRE-201ENST00000254667 RASAL1O95294 804 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 KCNJ5P48544 419 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 GRM7Q14831 915 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 SFT2D3Q587I9 215 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 DNAJC15Q9Y5T4 150 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 RGPD2P0DJD1 1756 aa18.17■□□□□ 0.5
PTPRE-201ENST00000254667 UNC119BA6NIH7 251 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 VILLO15195 856 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 SYNGR4O95473 234 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 KCTD18Q6PI47 426 aaPredicted RBP18.16■□□□□ 0.5
PTPRE-201ENST00000254667 CEP76Q8TAP6 659 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 TUBA1CQ9BQE3 449 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 RBCK1Q9BYM8 510 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 CLPXO76031 633 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 CDRT1O95170 752 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 HNRNPA2B1P22626 353 aaKnown RBP18.16■□□□□ 0.5
PTPRE-201ENST00000254667 OR4D2P58180 307 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 SEC23BQ15437 767 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 THOC7Q6I9Y2 204 aaKnown RBP18.16■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF782Q6ZMW2 699 aaPredicted RBP18.16■□□□□ 0.5
PTPRE-201ENST00000254667 HTR3DQ70Z44 454 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF367Q7RTV3 350 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 TP53INP2Q8IXH6 220 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 UBE2J2Q8N2K1 259 aa18.16■□□□□ 0.5
PTPRE-201ENST00000254667 METTL27Q8N6F8 245 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms