RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PRRG3Q9BZD7 231 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 ANGPT4Q9Y264 503 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 PPIL1Q9Y3C6 166 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 A0A0G2JMP0 313 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 HEPACAM2A8MVW5 462 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 POLR1CO15160 346 aaPredicted RBP14.79□□□□□ -0.04
DDX55-201ENST00000238146 TPD52L2O43399 206 aaKnown RBP14.79□□□□□ -0.04
DDX55-201ENST00000238146 PSIP1O75475 530 aaKnown RBP14.79□□□□□ -0.04
DDX55-201ENST00000238146 SLC16A8O95907 504 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 TSPAN19P0C672 248 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 SSTR4P31391 388 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 LMAN2Q12907 356 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 FAM214AQ32MH5 1076 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 C12orf73Q69YU5 71 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 C22orf42Q6IC83 251 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 PAMR1Q6UXH9 720 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 COMMD6Q7Z4G1 85 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 TCEANCQ8N8B7 351 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 APOBEC4Q8WW27 367 aaKnown RBP14.79□□□□□ -0.04
DDX55-201ENST00000238146 PPCDCQ96CD2 204 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 SUV39H2Q9H5I1 410 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 DKK3Q9UBP4 350 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 GPSM3Q9Y4H4 160 aa14.79□□□□□ -0.04
DDX55-201ENST00000238146 CCDC88CQ9P219 2028 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 NINQ8N4C6 2090 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 OR2AG2A6NM03 316 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 H3BN98 237 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 MYL12BO14950 172 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 CPNE3O75131 537 aaKnown RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 SEMA7AO75326 666 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 LATS1O95835 1130 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 HLA-DMAP28067 261 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 STK19P49842 368 aaPredicted RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 P2RX3P56373 397 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 FAPQ12884 760 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 C1DQ13901 141 aaKnown RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 PDE7AQ13946 482 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 PYDC2Q56P42 97 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 MFSD4BQ5TF39 518 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 RNLSQ5VYX0 342 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 CASP12Q6UXS9 341 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 YIPF7Q8N8F6 280 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 OR8J1Q8NGP2 316 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 NEIL2Q969S2 332 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 RERGLQ9H628 205 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 SAP18O00422 153 aaKnown RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 CELF2O95319 508 aaKnown RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 IMPA1P29218 277 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 ERP29P30040 261 aaKnown RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 SOAT1P35610 550 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 OPRD1P41143 372 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 HTR2BP41595 481 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 CTSOP43234 321 aaPredicted RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 XKP51811 444 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 C2orf80Q0P641 193 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 QPRTQ15274 297 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 FLYWCH1Q4VC44 716 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 IER5LQ5T953 404 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 SYCE2Q6PIF2 218 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 TMIGD1Q6UXZ0 262 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 CEACAM20Q6UY09 585 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 USP30Q70CQ3 517 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 LIX1LQ8IVB5 337 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 TCTE3Q8IZS6 198 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 ZFAND1Q8TCF1 268 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 SCAMP4Q969E2 229 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 NELL2Q99435 816 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 RSPO3Q9BXY4 272 aaPredicted RBP14.78□□□□□ -0.04
DDX55-201ENST00000238146 B4GALT6Q9UBX8 382 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 TMCC3Q9ULS5 477 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 PCDHB7Q9Y5E2 793 aa14.78□□□□□ -0.04
DDX55-201ENST00000238146 A0A0X1KG70 313 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 SMIM30A4D0T7 59 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 KLHL18O94889 574 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 CD70P32970 193 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 SDC2P34741 201 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 BDKRB1P46663 353 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 C19orf57Q0VDD7 668 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 DDI2Q5TDH0 399 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 MED27Q6P2C8 311 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 HSDL2Q6YN16 418 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 Q6ZNB5 142 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 SLCO4C1Q6ZQN7 724 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 CELF5Q8N6W0 485 aaKnown RBP14.77□□□□□ -0.04
DDX55-201ENST00000238146 OR56A3Q8NH54 315 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 WDR48Q8TAF3 677 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 ENKURQ8TC29 256 aa14.77□□□□□ -0.04
DDX55-201ENST00000238146 OR10H3O60404 316 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 ZNF780AO75290 641 aaPredicted RBP14.77□□□□□ -0.05
DDX55-201ENST00000238146 CCNYL3P0C7X3 344 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 CPN2P22792 545 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 ELAVL4P26378 380 aaKnown RBP14.77□□□□□ -0.05
DDX55-201ENST00000238146 IRS1P35568 1242 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 SLC9A3P48764 834 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 SNRPD1P62314 119 aaKnown RBP14.77□□□□□ -0.05
DDX55-201ENST00000238146 SMUG1Q53HV7 270 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 RPS26P11Q5JNZ5 115 aaPredicted RBP14.77□□□□□ -0.05
DDX55-201ENST00000238146 RFPL4BQ6ZWI9 263 aa14.77□□□□□ -0.05
DDX55-201ENST00000238146 TMPRSS11BQ86T26 416 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms