RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MARK1Q9P0L2 795 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 ANK1P16157 1881 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 L7N2F9 121 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 WNT9AO14904 365 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 JCHAINP01591 159 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 ARL2P36404 184 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 PTGFRP43088 359 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 JAG1P78504 1218 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 ABHD18Q0P651 414 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 CRHR2Q13324 411 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 NTRK2Q16620 822 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 FBXO39Q8N4B4 442 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 MDGA1Q8NFP4 955 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 HSD17B8Q92506 261 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 TM9SF4Q92544 642 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 EXOSC8Q96B26 276 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 ELMOD3Q96FG2 381 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 FCRL1Q96LA6 429 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 NELL2Q99435 816 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 YIPF4Q9BSR8 244 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 TFB2MQ9H5Q4 396 aaKnown RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 PRMT8Q9NR22 394 aaPredicted RBP12.45□□□□□ -0.42
MSH2-201ENST00000233146 TMEM184CQ9NVA4 438 aa12.45□□□□□ -0.42
MSH2-201ENST00000233146 J3KR12 359 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 CDC7O00311 574 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 GPR37O15354 613 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 TCRBP04435 133 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 FPR3P25089 353 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SWSAP1Q6NVH7 229 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ASB18Q6ZVZ8 466 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 RHOUQ7L0Q8 258 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ATF6BQ99941 703 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 DPAGT1Q9H3H5 408 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ZNF334Q9HCZ1 680 aaPredicted RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 RAD17O75943 681 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 EIF2S3P41091 472 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 CRKP46108 304 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 AVPR1BP47901 424 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 NR0B1P51843 470 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 ACTR1AP61163 376 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 TIAL1Q01085 375 aaKnown RBP eCLIP12.44□□□□□ -0.42
MSH2-201ENST00000233146 CCINQ13939 588 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 HLXQ14774 488 aaPredicted RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 NR6A1Q15406 480 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 CATSPERGQ6ZRH7 1159 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ZNF551Q7Z340 670 aaPredicted RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 KDELC2Q7Z4H8 507 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 CILP2Q8IUL8 1156 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 NAXDQ8IW45 347 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 KLHL36Q8N4N3 616 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 NANOGP1Q8N7R0 232 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 C1orf127Q8N9H9 656 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 GOT1L1Q8NHS2 421 aaPredicted RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 PHOSPHO1Q8TCT1 267 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 MTFMTQ96DP5 389 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 HSH2DQ96JZ2 352 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 C1QTNF3Q9BXJ4 246 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SLC25A19Q9HC21 320 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 AAR2Q9Y312 384 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 NUP205Q92621 2012 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SNAPC5O75971 98 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SIX6O95475 246 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ALDOBP05062 364 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 DRD2P14416 443 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 FDXRP22570 491 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ACSL1P33121 698 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 AFF1P51825 1210 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 CTSCP53634 463 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 RBMS2Q15434 407 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 RFTN2Q52LD8 501 aaPredicted RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 NOMO2Q5JPE7 1267 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SPANXN4Q5MJ08 99 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ELP2Q6IA86 826 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SLC5A8Q8N695 610 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 NPWQ8N729 165 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 SYT14Q8NB59 555 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 ZDHHC4Q9NPG8 344 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 CLN6Q9NWW5 311 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 MRTO4Q9UKD2 239 aaKnown RBP12.44□□□□□ -0.42
MSH2-201ENST00000233146 POFUT2Q9Y2G5 429 aa12.44□□□□□ -0.42
MSH2-201ENST00000233146 A0A1B0GV90 55 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 DDTLA6NHG4 134 aaPredicted RBP12.43□□□□□ -0.42
MSH2-201ENST00000233146 SUPT3HB4E1H0 165 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 CRYBA1P05813 215 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 CD63P08962 238 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 TFPIP10646 304 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 PAICSP22234 425 aaKnown RBP12.43□□□□□ -0.42
MSH2-201ENST00000233146 CD96P40200 585 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 XKP51811 444 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 SNRPEP62304 92 aaKnown RBP12.43□□□□□ -0.42
MSH2-201ENST00000233146 TNFRSF17Q02223 184 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 AVPI1Q5T686 147 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 LDLRAD3Q86YD5 345 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 CHURC1Q8WUH1 139 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 ADAMTS14Q8WXS8 1223 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 C7orf34Q96L11 122 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 FICDQ9BVA6 458 aa12.43□□□□□ -0.42
MSH2-201ENST00000233146 NLNQ9BYT8 704 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms