RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 DDX39BQ13838 428 aaKnown RBP16.9■□□□□ 0.3
PFN1-201ENST00000225655 MPP2Q14168 576 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 ABRAXAS2Q15018 415 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 EXT1Q16394 746 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 FRG2Q64ET8 278 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 ATG16L1Q676U5 607 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 CHSY3Q70JA7 882 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 RPS27LQ71UM5 84 aaKnown RBP16.9■□□□□ 0.3
PFN1-201ENST00000225655 ANKRD53Q8N9V6 530 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 PLPP5Q8NEB5 264 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 SRFBP1Q8NEF9 429 aaKnown RBP16.9■□□□□ 0.3
PFN1-201ENST00000225655 OR7G3Q8NG95 312 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 SUN3Q8TAQ9 357 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 RAB3IL1Q8TBN0 382 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 METTL6Q8TCB7 284 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 AGAP11Q8TF27 550 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 MOCOSQ96EN8 888 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 CMTM7Q96FZ5 175 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 PEX11GQ96HA9 241 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 FRG2BQ96QU4 278 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 LANCL2Q9NS86 450 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 NMRK1Q9NWW6 199 aa16.9■□□□□ 0.3
PFN1-201ENST00000225655 ZNF860A6NHJ4 632 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 A8MUI8 341 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 PRAMEF4O60810 478 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 PRAMEF2O60811 474 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 OR4F21O95013 312 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 ALOX12P18054 663 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 NSDHLQ15738 373 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 TMEM35AQ53FP2 167 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 PRAMEF9Q5VWM5 478 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 LETMD1Q6P1Q0 360 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 CDYL2Q8N8U2 506 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 OR5T3Q8NGG3 340 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 M1APQ8TC57 530 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 FAR2Q96K12 515 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 ZNF354BQ96LW1 612 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 MMP25Q9NPA2 562 aa16.89■□□□□ 0.29
PFN1-201ENST00000225655 ZNF490Q9ULM2 529 aaPredicted RBP16.89■□□□□ 0.29
PFN1-201ENST00000225655 CROCCQ5TZA2 2017 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 A0A1B0GUH1 482 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 FOXE1O00358 373 aaPredicted RBP16.88■□□□□ 0.29
PFN1-201ENST00000225655 ULK1O75385 1050 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
PFN1-201ENST00000225655 RASAL1O95294 804 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 CRYABP02511 175 aaKnown RBP16.88■□□□□ 0.29
PFN1-201ENST00000225655 JAK1P23458 1154 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 PTX3P26022 381 aaPredicted RBP16.88■□□□□ 0.29
PFN1-201ENST00000225655 COL8A1P27658 744 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 RAP1GDS1P52306 607 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 STX3Q13277 289 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 DEFB134Q4QY38 66 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 SFT2D3Q587I9 215 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 TOR1AIP1Q5JTV8 583 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 ACER2Q5QJU3 275 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 TRIM40Q6P9F5 258 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 ZCCHC23Q6ZST2 131 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 DNAJB8Q8NHS0 232 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 HUS1BQ8NHY5 278 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 SELENOMQ8WWX9 145 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 TBC1D20Q96BZ9 403 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 RBCK1Q9BYM8 510 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 ROGDIQ9GZN7 287 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 REXO4Q9GZR2 422 aaKnown RBP16.88■□□□□ 0.29
PFN1-201ENST00000225655 KCNK13Q9HB14 408 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 PFDN4Q9NQP4 134 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 INTS9Q9NV88 658 aaKnown RBP16.88■□□□□ 0.29
PFN1-201ENST00000225655 ABI3Q9P2A4 366 aa16.88■□□□□ 0.29
PFN1-201ENST00000225655 PPP6CO00743 305 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 CHST10O43529 356 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 FHP07954 510 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 ZNF888P0CJ79 500 aaPredicted RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 UROSP10746 265 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 BGNP21810 368 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 DCTP40126 519 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 WDR4P57081 412 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 ABCE1P61221 599 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 SGO1Q5FBB7 561 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 ARL13AQ5H913 290 aaPredicted RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 ZNF787Q6DD87 383 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 BEST3Q8N1M1 668 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 UTP15Q8TED0 518 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 CREB3L4Q8TEY5 395 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 ZNF473Q8WTR7 871 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 GAL3ST3Q96A11 431 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 MTERF1Q99551 399 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 SERPINI1Q99574 410 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 LPAR4Q99677 370 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 SLC6A16Q9GZN6 736 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 COPS7BQ9H9Q2 264 aaPredicted RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 CLK4Q9HAZ1 481 aaKnown RBP16.87■□□□□ 0.29
PFN1-201ENST00000225655 DMRT3Q9NQL9 472 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 PSD3Q9NYI0 1048 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 PCDHGB6Q9Y5F9 930 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 CENPEQ02224 2701 aa16.87■□□□□ 0.29
PFN1-201ENST00000225655 MANBAO00462 879 aa16.86■□□□□ 0.29
PFN1-201ENST00000225655 DNAJB6O75190 326 aa16.86■□□□□ 0.29
PFN1-201ENST00000225655 HSD3B1P14060 373 aa16.86■□□□□ 0.29
PFN1-201ENST00000225655 CHN1P15882 459 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms