RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 BBS10Q8TAM1 723 aa17.68■□□□□ 0.42
CLIP2-201ENST00000223398 SLC22A8Q8TCC7 542 aa17.68■□□□□ 0.42
CLIP2-201ENST00000223398 ACTR3BQ9P1U1 418 aa17.68■□□□□ 0.42
CLIP2-201ENST00000223398 ZNF878C9JN71 531 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 P04436 131 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 CD36P16671 472 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 AP3S2P59780 193 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 VBP1P61758 197 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 ARHGAP22Q7Z5H3 698 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 ZNF283Q8N7M2 679 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 STON2Q8WXE9 905 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 TRIM63Q969Q1 353 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 ASB6Q9NWX5 421 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 IFT52Q9Y366 437 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 GPR89AB7ZAQ6 455 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 GPR89BP0CG08 455 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 GMFBP60983 142 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 ABCA11PQ4W5N1 156 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 KLHL26Q53HC5 615 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 NANOGP8Q6NSW7 305 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 UNC5DQ6UXZ4 953 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 LPAR4Q99677 370 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 NANOGQ9H9S0 305 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 ZNF432O94892 652 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 FPR1P21462 350 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 GJA4P35212 333 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 ZNF100Q8IYN0 542 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 OR8K3Q8NH51 312 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 SMIM14Q96QK8 99 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 TRIB3Q96RU7 358 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 PKP2Q99959 881 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 URB1O60287 2271 aaKnown RBP17.67■□□□□ 0.42
CLIP2-201ENST00000223398 AURKAO14965 403 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 CLPXO76031 633 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 CDHR3Q6ZTQ4 885 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 TCEANCQ8N8B7 351 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 OR5L2Q8NGL0 311 aa17.67■□□□□ 0.42
CLIP2-201ENST00000223398 PGAP3Q96FM1 320 aaPredicted RBP17.67■□□□□ 0.42
CLIP2-201ENST00000223398 KLHL33A6NCF5 533 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 FABP12A6NFH5 140 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 ZBTB42B2RXF5 422 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 HK1P19367 917 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 SELENOVP59797 346 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 SCN1BQ07699 218 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 DMPKQ09013 629 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 IRF4Q15306 451 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 C6orf120Q7Z4R8 191 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 ZFYVE21Q9BQ24 234 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 MACROD1Q9BQ69 325 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 EHD1Q9H4M9 534 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 LINC00471Q8N535 108 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 BRF2Q9HAW0 419 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 ADORA3P0DMS8 318 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 SLC18A1P54219 525 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 FCHO2Q0JRZ9 810 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 ZNF789Q5FWF6 425 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 B3GNT9Q6UX72 402 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 PCDHGB1Q9Y5G3 927 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 MYH11P35749 1972 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 LOC100130705A0A1B0GUX0 176 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 BTBD16Q32M84 506 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 DGLUCYQ7Z3D6 616 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 TMEM184CQ9NVA4 438 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 STOX2Q9P2F5 926 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-201ENST00000223398 MKLN1Q9UL63 735 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 A0A1B0GVI7 797 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 SDHDO14521 159 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 POLR1CO15160 346 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-201ENST00000223398 ZSCAN4Q8NAM6 433 aaPredicted RBP17.66■□□□□ 0.42
CLIP2-201ENST00000223398 MDGA1Q8NFP4 955 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 OR52P1PQ8NH57 321 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 ASB15Q8WXK1 588 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 MAPKAP1Q9BPZ7 522 aa17.66■□□□□ 0.42
CLIP2-201ENST00000223398 SMIM30A4D0T7 59 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 CD6P30203 668 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 TCTE1Q5JU00 501 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 C10orf62Q5T681 223 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-201ENST00000223398 SDR16C5Q8N3Y7 309 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 FAM86B1Q8N7N1 296 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 RMI1Q9H9A7 625 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 SCGNO76038 276 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 KLHDC10Q6PID8 442 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 LIPIQ6XZB0 460 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 ACVR1CQ8NER5 493 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 OR56A3Q8NH54 315 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 ERMAPQ96PL5 475 aaPredicted RBP17.65■□□□□ 0.42
CLIP2-201ENST00000223398 KCMF1Q9P0J7 381 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 CCL26Q9Y258 94 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 SOCS7O14512 581 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 GJB3O75712 270 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 RORAP35398 523 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 GJA8P48165 433 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 GBX1Q14549 363 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 NR0B2Q15466 257 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 CRB3Q9BUF7 120 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 HTR1AP08908 422 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 TNFRSF4P43489 277 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 TMEM35AQ53FP2 167 aa17.65■□□□□ 0.42
CLIP2-201ENST00000223398 BORCS5Q969J3 196 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms