RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CBX1P83916 185 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 DNASE1L3Q13609 305 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 GKAP1Q5VSY0 366 aaPredicted RBP25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 ZNF595Q8IYB9 648 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 DPY30Q9C005 99 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 PRTFDC1Q9NRG1 225 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 NXT1Q9UKK6 140 aaKnown RBP25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 WBP11Q9Y2W2 641 aaKnown RBP25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 PTRH2Q9Y3E5 179 aaKnown RBP25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 NCOR2Q9Y618 2525 aa25.64■■□□□ 1.69
CHMP4B-201ENST00000217402 NDUFAB1O14561 156 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 ANKRD28O15084 1053 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 LDB3O75112 727 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 DRD2P14416 443 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 DDCP20711 480 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 MAOAP21397 527 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 HPCAL1P37235 193 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 CLDN8P56748 225 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 PCBP4P57723 403 aaKnown RBP25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 UFM1P61960 85 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 RPS18P62269 152 aaKnown RBP25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 ID2Q02363 134 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 SLC13A2Q13183 592 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 METTL21CQ5VZV1 264 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 OR52E8Q6IFG1 317 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 TICAM1Q8IUC6 712 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 FAM9CQ8IZT9 166 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 MIER2Q8N344 545 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 BCAS4Q8TDM0 211 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 NAF1Q96HR8 494 aaKnown RBP25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 VN1R1Q9GZP7 353 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 SDR39U1Q9NRG7 319 aaPredicted RBP25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 ASPMQ8IZT6 3477 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 C9JVG2 144 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 CLDN4O14493 209 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 F8A1P23610 371 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 EFNA3P52797 238 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 RPS15P62841 145 aaKnown RBP25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 PDCD4Q53EL6 469 aaKnown RBP25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 FAM180BQ6P0A1 224 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 SLC48A1Q6P1K1 146 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 OR4N5Q8IXE1 308 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 FGF11Q92914 225 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 TEX37Q96LM6 180 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 REEP4Q9H6H4 257 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 PADI2Q9Y2J8 665 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 ARL2BPQ9Y2Y0 163 aa25.63■■□□□ 1.69
CHMP4B-201ENST00000217402 FREM2Q5SZK8 3169 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 C21orf140B9A014 251 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 SCAMP2O15127 329 aaKnown RBP25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 PRMT3O60678 531 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 KLF7O75840 302 aaPredicted RBP25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 FURINP09958 794 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 RAB40ALP0C0E4 278 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 PRPS1L1P21108 318 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 ACTN3Q08043 901 aaPredicted RBP25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 PAOXQ6QHF9 649 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 OR9I1Q8NGQ6 314 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 DNAJB14Q8TBM8 379 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 EXOSC8Q96B26 276 aaKnown RBP25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 KLHL29Q96CT2 875 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 CRB3Q9BUF7 120 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 UTS2RQ9UKP6 389 aa25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 FARSAQ9Y285 508 aaKnown RBP25.62■■□□□ 1.69
CHMP4B-201ENST00000217402 MYOCOSA0A1B0GUC4 107 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 IDSB3KWA1 339 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 TERTO14746 1132 aaKnown RBP25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 TLX3O43711 291 aaPredicted RBP25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 FGF17O60258 216 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 ERAL1O75616 437 aaKnown RBP25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 HEXBP07686 556 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 COX7A2P14406 83 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 FOLR3P41439 243 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 RHAGQ02094 409 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 FOLH1Q04609 750 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 SQLEQ14534 574 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 VASH2Q86V25 355 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 RIMKLAQ8IXN7 391 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 OR7A2PQ8NGA2 310 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 TANKQ92844 425 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 GATA6Q92908 595 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 TSLPQ969D9 159 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 KIAA1143Q96AT1 154 aaPredicted RBP25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 PPCDCQ96CD2 204 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 PTCHD1Q96NR3 888 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 SCN2AQ99250 2005 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 NMUR2Q9GZQ4 415 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 ZNF385DQ9H6B1 395 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 GPN2Q9H9Y4 310 aaPredicted RBP25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 C3orf18Q9UK00 162 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 CES1P1Q9UKY3 287 aa25.61■■□□□ 1.69
CHMP4B-201ENST00000217402 NUP210LQ5VU65 1888 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 BLACEA4D250 179 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 HSD17B7P56937 341 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 CLN3Q13286 438 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 UBAP2LQ14157 1087 aaKnown RBP25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 UGT8Q16880 541 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 FAAH2Q6GMR7 532 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 QSOX2Q6ZRP7 698 aa25.6■■□□□ 1.69
CHMP4B-201ENST00000217402 SCUBE1Q8IWY4 988 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms