RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZCCHC8Q6NZY4 707 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SATL1Q86VE3 508 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EPHX4Q8IUS5 362 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 C19orf47Q8N9M1 422 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OSBPL11Q9BXB4 747 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CHST8Q9H2A9 424 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CORO2BQ9UQ03 480 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CSNK1G3Q9Y6M4 447 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 URADA6NGE7 173 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GLOD5A6NK44 160 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZSCAN9O15535 394 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 HRO43593 1189 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TPST1O60507 370 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GUCY1B2O75343 617 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 AIFM1O95831 613 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FESP07332 822 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 UMPSP11172 480 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DDX5P17844 614 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 IL10P22301 178 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ARRB1P49407 418 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SUZ12Q15022 739 aaKnown RBP18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RGNQ15493 299 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ADRM1Q16186 407 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DEFB134Q4QY38 66 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PTOV1Q86YD1 416 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TMEM105Q8N8V8 129 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OR5AK3PQ8NH89 298 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MAP3K3Q99759 626 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DPH2Q9BQC3 489 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 UTS2RQ9UKP6 389 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ACSL6Q9UKU0 697 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 V9GYQ6 96 aa18.63■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SLC9B1P1A6NJY1 282 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PROM1O43490 865 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TNFAIP8O95379 198 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CALRP27797 417 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RXRGP48443 463 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MANFP55145 182 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CNPY1Q3B7I2 92 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NHSL2Q5HYW2 709 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.62■□□□□ 0.574e-6■■■□□ 16.5
TNFRSF1A-201ENST00000162749 C18orf63Q68DL7 685 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CARM1Q86X55 608 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZZZ3Q8IYH5 903 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OR52E4Q8NGH9 312 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MAPKAP1Q9BPZ7 522 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CXorf36Q9H7Y0 433 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NEUROD4Q9HD90 331 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 C1GALT1Q9NS00 363 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 LRIT1Q9P2V4 623 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ANAPC2Q9UJX6 822 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MRPS2Q9Y399 296 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RNF215Q9Y6U7 377 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SAC3D1A6NKF1 404 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DLGAP1O14490 977 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PGRMC2O15173 223 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CREG1O75629 220 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 COL9A2Q14055 689 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 C16orf72Q14CZ0 275 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 DEFB110Q30KQ9 67 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CPZQ66K79 652 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ANGPTL8Q6UXH0 198 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FAM92BQ6ZTR7 304 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ABHD13Q7L211 337 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SLC35F3Q8IY50 421 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ARL10Q8N8L6 244 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NETO1Q8TDF5 533 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OR5P2Q8WZ92 322 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NCLNQ969V3 563 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZBED6CLQ96FA7 236 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SLC35C2Q9NQQ7 365 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SUSD2Q9UGT4 822 aa18.62■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TMEM221A6NGB7 291 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RHPN2P1A8MT19 583 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 M0R296 226 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PLOD2O00469 737 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 C9P02748 559 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 RETP07949 1114 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NUDT7P0C024 238 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 IL1RNP18510 177 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FASP25445 335 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CLCN2P51788 898 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GFERP55789 205 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 VSX2P58304 361 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 VMACQ2NL98 169 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TMEM214Q6NUQ4 689 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZNF655Q8N720 491 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CSNK1A1LQ8N752 337 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 KLHL6Q8WZ60 621 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FAM162AQ96A26 154 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SEPHS2Q99611 448 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TMEM121BQ9BXQ6 578 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ROGDIQ9GZN7 287 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ACSS1Q9NUB1 689 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 LYARQ9NX58 379 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NINQ8N4C6 2090 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PDLIM1O00151 329 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NUDT21O43809 227 aaKnown RBP18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 AHCYL1O43865 530 aa18.61■□□□□ 0.57
TNFRSF1A-201ENST00000162749 OR6B1O95007 311 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms