RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 RPS17P08708 135 aaKnown RBP17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ICAM2P13598 275 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ART1P52961 327 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MTTPP55157 894 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RHAGQ02094 409 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RUNX2Q13950 521 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PCOLCEQ15113 449 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 KRTCAP3Q53RY4 240 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CHSY3Q70JA7 882 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RPS27LQ71UM5 84 aaKnown RBP17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CPEB2Q7Z5Q1 589 aaKnown RBP17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 L3MBTL4Q8NA19 623 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OR52B6Q8NGF0 335 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OR2W6PQ8NHA6 318 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 HUS1BQ8NHY5 278 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CAVIN3Q969G5 261 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 QRFPRQ96P65 431 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CDK15Q96Q40 435 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NTMT1Q9BV86 223 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NPLQ9BXD5 320 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ZNF700Q9H0M5 742 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ZBTB26Q9HCK0 441 aa17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SEMA4BQ9NPR2 832 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NPIPA5E9PKD4 350 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 H0YIV9 168 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NUDT17P0C025 328 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ATP5F1P24539 256 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PIK3CBP42338 1070 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RAB38P57729 211 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ALDH6A1Q02252 535 aaKnown RBP17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ABRAXAS2Q15018 415 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NSDHLQ15738 373 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TMEM35AQ53FP2 167 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ANKRD37Q7Z713 158 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RNF175Q8N4F7 328 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 AMER2Q8N7J2 671 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TSLPQ969D9 159 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 KCNC2Q96PR1 638 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SERINC2Q96SA4 455 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MTERF1Q99551 399 aaKnown RBP17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CENPKQ9BS16 269 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TUBB6Q9BUF5 446 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 C1QTNF3Q9BXJ4 246 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ROGDIQ9GZN7 287 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OR51B5Q9H339 312 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 DMRT3Q9NQL9 472 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NPIPA1Q9UND3 350 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TSC22D4Q9Y3Q8 395 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CPAMD8Q8IZJ3 1885 aa17.69■□□□□ 0.42
TRAPPC6A-201ENST00000006275 NIPBLQ6KC79 2804 aaeCLIP17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 IGHV3-20A0A0C4DH32 117 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 A8MUI8 341 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MAGEB17A8MXT2 336 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 DLX3O60479 287 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PRMT3O60678 531 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SEC24DO94855 1032 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SUPT7LO94864 414 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ABOP16442 354 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CERS1P27544 350 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CCT5P48643 541 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RAP1GDS1P52306 607 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CDH13P55290 713 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 HERVK_113P63132 956 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 BTG2P78543 158 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ACTN3Q08043 901 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TRAF3Q13114 568 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 DEPDC1Q5TB30 811 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 KHDRBS2Q5VWX1 349 aaKnown RBP17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 QSOX2Q6ZRP7 698 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SH2D5Q6ZV89 423 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 UBE3DQ7Z6J8 389 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 MILR1Q7Z6M3 343 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SLC22A9Q8IVM8 553 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RIBC1Q8N443 379 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ACBD4Q8NC06 268 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ZNF483Q8TF39 744 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 CA5BP1Q8WTZ4 195 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PTCHD1Q96NR3 888 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TBCDQ9BTW9 1192 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ERVK-6Q9BXR3 956 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PRDM7Q9NQW5 492 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 KLHL1Q9NR64 748 aa17.68■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SAP18O00422 153 aaKnown RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RTCAO00442 366 aaKnown RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OTCP00480 354 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TSPAN8P19075 237 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OR4D2P58180 307 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 RPS13P62277 151 aaKnown RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 AP5B1Q2VPB7 878 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SFT2D3Q587I9 215 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 ZNF678Q5SXM1 525 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 TTC19Q6DKK2 380 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 BEST3Q8N1M1 668 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 OR4F6Q8NGB9 312 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 WDR20Q8TBZ3 569 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 AGAP11Q8TF27 550 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 PHF10Q8WUB8 498 aaKnown RBP17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 SDCCAG3Q96C92 435 aa17.67■□□□□ 0.42
TRAPPC6A-201ENST00000006275 IMMP1LQ96LU5 166 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms