RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Gpalpp1Q69ZC8 346 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 GalpQ810H5 117 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Fem1abQ8C0T1 654 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Foxe1Q8R2I0 371 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmem30aQ8VEK0 364 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr1Q8VGI1 314 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zswim1Q9CWV7 455 aaKnown RBP11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Stard5Q9EPQ7 213 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Khdrbs2Q9WU01 349 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 H2-T23P06339 357 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc11a1P41251 548 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cdkn2bP55271 130 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Adamts8P57110 905 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Eef1a2P62631 463 aaKnown RBP11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cyp20a1Q8BKE6 462 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rdh12Q8BYK4 316 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cys1Q8R4T1 145 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mtfr2Q8VED8 361 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dusp12Q9D0T2 339 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 PacrglQ9D3X5 248 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cacng3Q9JJV5 315 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Upk1bQ9Z2C6 260 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Arfip1G5E8V9 373 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Folr1P35846 255 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Kcnj12P52187 427 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rps17P63276 135 aaKnown RBP11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Q32P12 615 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dusp23Q6NT99 150 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr845Q7TRG2 312 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 PdprQ7TSQ8 878 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Tmem185bQ8R3R5 350 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rcbtb2Q99LJ7 551 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mrpl49Q9CQ40 166 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ap3s1Q9DCR2 193 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Enpp2Q9R1E6 862 aa11.39□□□□□ -0.59
Pcif1-201ENSMUST00000041643 NynrinQ5DTZ0 1840 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Dock2Q8C3J5 1828 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Agpat1O35083 285 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Scarb2O35114 478 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 NsmafO35242 920 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cyp21P03940 487 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pdcd5P56812 126 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Six5P70178 719 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Sec1P97353 368 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Coq7P97478 217 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pyroxd2Q3U4I7 581 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Kbtbd8Q3UQV5 599 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Fam189bQ5HZJ5 669 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Il18r1Q61098 537 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr1197Q7TR13 314 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr1196Q7TR14 314 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pou6f2Q8BJI4 691 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Klhl24Q8BRG6 600 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 AgmoQ8BS35 447 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Mthfd1Q922D8 935 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rasgef1aA0A0N4SVR5 498 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 1700014D04RikJ3QMS2 983 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm3476K7N6V0 257 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Angpt1O08538 498 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Nthl1O35980 300 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 H2-Eb2Q3UUV9 287 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Fam20cQ5MJS3 579 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 ScapQ6GQT6 1276 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Amer3Q6NS69 780 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr301Q7TS04 311 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gstm7Q80W21 218 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Slc36a2Q8BHK3 478 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn1r38Q8R2E1 302 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Itgbl1Q8VDV0 494 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Chchd6Q91VN4 273 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Krcc1Q99JT5 256 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Phf6Q9D4J7 364 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Spin2gA0A0N4SW15 236 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Esp22A8R0V4 111 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm5478D3Z6R0 159 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn2r35E9Q7U8 861 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Gm44G3UW88 330 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Zfp809G3X9G7 402 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Spin2eJ3QNQ0 234 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Vmn2r8L7N472 848 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 DcnP28654 354 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Psme2P97372 239 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 AnpepP97449 966 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Grhl3Q5FWH3 603 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Map4k5Q8BPM2 847 aaKnown RBP11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cant1Q8VCF1 403 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Olfr350Q8VFP8 312 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Txndc17Q9CQM5 123 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pfdn1Q9CWM4 122 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Twist2Q9D030 160 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Rgs20Q9QZB1 239 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Ephb6O08644 1014 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Pde7aP70453 456 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 UqcrhP99028 89 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Acss3Q14DH7 682 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Hk3Q3TRM8 922 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Usp30Q3UN04 517 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Grb10Q60760 621 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Cd34Q64314 382 aa11.38□□□□□ -0.59
Pcif1-201ENSMUST00000041643 Micu2Q8CD10 432 aa11.38□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms