RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FKBP10Q96AY3 582 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 TBC1D20Q96BZ9 403 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 MTERF3Q96E29 417 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 PEX11GQ96HA9 241 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 TSSK3Q96PN8 268 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 DPY30Q9C005 99 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 CHST8Q9H2A9 424 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 WDR41Q9HAD4 459 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 TMEM45AQ9NWC5 275 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 HCN3Q9P1Z3 774 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 TRPC4Q9UBN4 977 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 GPN3Q9UHW5 284 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 MRPS33Q9Y291 106 aaKnown RBP11.62□□□□□ -0.55
LINC00339-213ENST00000642137 ARL2BPQ9Y2Y0 163 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 PCDHA9Q9Y5H5 950 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 SDK2Q58EX2 2172 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 SCN2AQ99250 2005 aa11.62□□□□□ -0.55
LINC00339-213ENST00000642137 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CROCCQ5TZA2 2017 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CCDC88CQ9P219 2028 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 TEX51A0A1B0GUA7 166 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 C9J4A7 227 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 FAM227AF5H4B4 570 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CLDN4O14493 209 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 RAD1O60671 282 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 TBX19O60806 448 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CCDC22O60826 627 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CTNSO60931 367 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 FHP07954 510 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 IL3P08700 152 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 DDCP20711 480 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 PRPS1L1P21108 318 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 JAK1P23458 1154 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 ADSLP30566 484 aaPredicted RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 XCR1P46094 333 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CBX1P83916 185 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 TNFRSF17Q02223 184 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 BIKQ13323 160 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 NKG7Q16617 165 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 NDUFAF5Q5TEU4 345 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 MLIPQ5VWP3 458 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 C18orf63Q68DL7 685 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 FAM199XQ6PEV8 388 aaPredicted RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 R3HCC1LQ7Z5L2 792 aaKnown RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 ZNF595Q8IYB9 648 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 PLPP5Q8NEB5 264 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 STT3BQ8TCJ2 826 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 MIEF2Q96C03 454 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 RNF31Q96EP0 1072 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CATSPER2Q96P56 530 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 REEP4Q9H6H4 257 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 RPF2Q9H7B2 306 aaKnown RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 WDR54Q9H977 334 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 SDR39U1Q9NRG7 319 aaPredicted RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 C14orf105Q9NVL8 296 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 TEX10Q9NXF1 929 aaPredicted RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 TAS2R7Q9NYW3 318 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 EHD3Q9NZN3 535 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 ZIM2Q9NZV7 527 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 CES1P1Q9UKY3 287 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 PSME2Q9UL46 239 aa11.61□□□□□ -0.55
LINC00339-213ENST00000642137 EXO1Q9UQ84 846 aaKnown RBP11.61□□□□□ -0.55
LINC00339-213ENST00000642137 GABRR3A8MPY1 467 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 NDUFAB1O14561 156 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 PGRMC2O15173 223 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SLC22A3O75751 556 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 AIFM1O95831 613 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 ZGLP1P0C6A0 271 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 NR2F6P10588 404 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 DDX5P17844 614 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 TCN2P20062 427 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SPINK2P20155 84 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 GPX3P22352 226 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 HSD17B7P56937 341 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 STX1BP61266 288 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 UFM1P61960 85 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SHC2P98077 582 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 MC1RQ01726 317 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 ERV3-1Q14264 604 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SQLEQ14534 574 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 PTGR1Q14914 329 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 TBC1D25Q3MII6 688 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 VWA2Q5GFL6 755 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SLC48A1Q6P1K1 146 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 FAM198BQ6UWH4 519 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 RIMKLAQ8IXN7 391 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 CACNA2D3Q8IZS8 1091 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 SHISA5Q8N114 240 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 MIER2Q8N344 545 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 GLB1L3Q8NCI6 653 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-213ENST00000642137 CCDC197Q8NCU1 140 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 DNAJB14Q8TBM8 379 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 STARD8Q92502 1023 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 UCN3Q969E3 161 aa11.6□□□□□ -0.55
LINC00339-213ENST00000642137 NKD1Q969G9 470 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms