RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	RTCA	O00442	366 aa	Known RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	PLPP1	O14494	284 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	GUCY1B2	O75343	617 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	PROC	P04070	461 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	ENO1	P06733	434 aa	Known RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	MAOA	P21397	527 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	CPN2	P22792	545 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	BSG	P35613	385 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	NEK2	P51955	445 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	ARG2	P78540	354 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	FOXK1	P85037	733 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	ELAVL1	Q15717	326 aa	Known RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	MEP1A	Q16819	746 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	RPUSD3	Q6P087	351 aa	Known RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	CYP20A1	Q6UW02	462 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	LINC00696	Q6ZRV3	163 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	GPRIN3	Q6ZVF9	776 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	ATCAY	Q86WG3	371 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	NUDT13	Q86X67	352 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	SHISA5	Q8N114	240 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	SIRT6	Q8N6T7	355 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	GBP7	Q8N8V2	638 aa	Predicted RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	B3GNT7	Q8NFL0	401 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	CPT1C	Q8TCG5	803 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	ELP5	Q8TE02	316 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	SELENOM	Q8WWX9	145 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	DAZL	Q92904	295 aa	Known RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	TMEM237	Q96Q45	408 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	MAPKAP1	Q9BPZ7	522 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	MFRP	Q9BY79	579 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	RYDEN	Q9NUL5	291 aa	Known RBP	13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	VTI1B	Q9UEU0	232 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	EMCN	Q9ULC0	261 aa		13.36	□□□□□ -0.27
SDHD-209	ENST00000640554	FASN	P49327	2511 aa	Known RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554		A8MUI8	341 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554		G3V2L1	256 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	SAP18	O00422	153 aa	Known RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	PROM1	O43490	865 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	DYRK3	O43781	588 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	SH3BGRL	O75368	114 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	ULK1	O75385	1050 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	ESRRB	O95718	433 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	CPA3	P15088	417 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	CD97	P48960	835 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	KCNC4	Q03721	635 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	ZNF169	Q14929	603 aa	Predicted RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	INPP5J	Q15735	1006 aa	Predicted RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	CFAP157	Q5JU67	520 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	ACER2	Q5QJU3	275 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	MRM1	Q6IN84	353 aa	Known RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	LETMD1	Q6P1Q0	360 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	TRABD2A	Q86V40	505 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	HORMAD2	Q8N7B1	307 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	CCDC63	Q8NA47	563 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	FAM47B	Q8NA70	645 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	NFAM1	Q8NET5	270 aa	Predicted RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	SUN3	Q8TAQ9	357 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	METTL6	Q8TCB7	284 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	MTFMT	Q96DP5	389 aa	Known RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	PELO	Q9BRX2	385 aa	Known RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	ALOXE3	Q9BYJ1	711 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	RPF2	Q9H7B2	306 aa	Known RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	OXSM	Q9NWU1	459 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	FBXW2	Q9UKT8	454 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	PLLP	Q9Y342	182 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	CLCA3P	Q9Y6N3	262 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554		V9GYY5	206 aa	Predicted RBP	13.35	□□□□□ -0.27
SDHD-209	ENST00000640554	CCDC88C	Q9P219	2028 aa		13.35	□□□□□ -0.27
SDHD-209	ENST00000640554		A0A0A6YYD5	115 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	ARHGAP10	A1A4S6	786 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	SERTM1	A2A2V5	107 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	OR4F21	O95013	312 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	IFNA16	P05015	189 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	FAM58BP	P0C7Q3	252 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	COX7A2	P14406	83 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	HMOX2	P30519	316 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	TNFSF10	P50591	281 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	CLCN2	P51788	898 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	CSTF3	Q12996	717 aa	Known RBP	13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	INA	Q16352	499 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	RPS19BP1	Q86WX3	136 aa	Known RBP	13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	ARMC10	Q8N2F6	343 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	METTL4	Q8N3J2	472 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	CCNYL1	Q8N7R7	359 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	BANP	Q8N9N5	519 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554		Q8NA96	180 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	GALNT11	Q8NCW6	608 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	MORN4	Q8NDC4	146 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	OR2W6P	Q8NHA6	318 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	OR14A16	Q8NHC5	309 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	SREK1	Q8WXA9	508 aa	Known RBP	13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	MIB2	Q96AX9	1013 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	VMP1	Q96GC9	406 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	RBM18	Q96H35	190 aa	Known RBP	13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	APOPT1	Q96IL0	206 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	SMC6	Q96SB8	1091 aa		13.34	□□□□□ -0.27
SDHD-209	ENST00000640554	TRMO	Q9BU70	441 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms