RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CES4AQ5XG92 561 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 KRT77Q7Z794 578 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 RTN4RL1Q86UN2 441 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 LHFPL3Q86UP9 236 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ELOA3Q8NG57 546 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 TMEM80Q96HE8 168 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF334Q9HCZ1 680 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 HRASLS2Q9NWW9 162 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 COMMD9Q9P000 198 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 TMEM150CB9EJG8 249 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 CPNE3O75131 537 aaKnown RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 CDC123O75794 336 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 RPP14O95059 124 aaKnown RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 DEFB119Q8N690 84 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 OR5AR1Q8NGP9 310 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 METTL21AQ8WXB1 218 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 DPYSL5Q9BPU6 564 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 SLC2A11Q9BYW1 496 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 EHD1Q9H4M9 534 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 E2F3O00716 465 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 SLC2A2P11168 524 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 SLC9A3P48764 834 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 TXNL4AP83876 142 aaKnown RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 C1orf61Q13536 156 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF542PQ5EBM4 170 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 IRAK1BP1Q5VVH5 260 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ADNP2Q6IQ32 1131 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 OR52E4Q8NGH9 312 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 OR51G2Q8NGK0 314 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 OR51A7Q8NH64 312 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 GTF2H4Q92759 462 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 GPR83Q9NYM4 423 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 PHF11Q9UIL8 331 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 FAM25EA8MYX2 175 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 WASH3PC4AMC7 463 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 CCRL2O00421 344 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 MID1O15344 667 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 VEGFDO43915 354 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF821O75541 412 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 POLR2IP36954 125 aaKnown RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 TRAM2Q15035 370 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 NNATQ16517 81 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 Q6ZSR9 355 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ZSWIM9Q86XI8 627 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 C16orf78Q8WTQ4 265 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 MND1Q9BWT6 205 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 RC3H2Q9HBD1 1191 aaKnown RBP13.81□□□□□ -0.2
SCARB2-216ENST00000639300 LHX3Q9UBR4 397 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 CDH7Q9ULB5 785 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 PCDHGA8Q9Y5G5 932 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 USP54Q70EL1 1684 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ANHXE9PGG2 379 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 LCKP06239 509 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 CD72P21854 359 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 PDHA2P29803 388 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 PTGER1P34995 402 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 BMPR1AP36894 532 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ABATP80404 500 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ANKDD1AQ495B1 522 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 TMEM207Q6UWW9 146 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 FUNDC1Q8IVP5 155 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 MFSD6LQ8IWD5 586 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 ANKLE1Q8NAG6 615 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 OR4K14Q8NGD5 310 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 SMARCD2Q92925 531 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 TMEM19Q96HH6 336 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 OR51I1Q9H343 314 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 MED31Q9Y3C7 131 aa13.81□□□□□ -0.2
SCARB2-216ENST00000639300 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 ORC5O43913 435 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RCBTB2O95199 551 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RETP07949 1114 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 IL12BP29460 328 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 BMP8BP34820 402 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 CRISP1P54107 249 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 DUS1LQ6P1R4 473 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 BMP8AQ7Z5Y6 402 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 DCP2Q8IU60 420 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 RNF31Q96EP0 1072 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 SLC30A2Q9BRI3 323 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 BRD7Q9NPI1 651 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 LSM1O15116 133 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 HLA-DPB1P04440 258 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 ADRB3P13945 408 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF24P17028 368 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 BMXP51813 675 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 ENPP2Q13822 863 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 PIWIL3Q7Z3Z3 882 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 CHST4Q8NCG5 386 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 OR9Q2Q8NGE9 314 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 TUBA1CQ9BQE3 449 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 SORBS1Q9BX66 1292 aaKnown RBP13.8□□□□□ -0.2
SCARB2-216ENST00000639300 TCF7L1Q9HCS4 588 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 CDK5RAP2Q96SN8 1893 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 PRAMEF33A0A0G2JMD5 474 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 PCDHGA12O60330 932 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 PRAMEF10O60809 474 aa13.8□□□□□ -0.2
SCARB2-216ENST00000639300 AGR2O95994 175 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms