RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RPL23AP62750 156 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 WDR45Q9Y484 360 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 NEMP2A6NFY4 417 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 CTDNEP1O95476 244 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 MT-ND1P03886 318 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 ADORA2AP29274 412 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 FITM2Q8N6M3 262 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 ZCCHC10Q8TBK6 192 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 UQCC2Q9BRT2 126 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 STUB1Q9UNE7 303 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 NDUFS4O43181 175 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 CPT2P23786 658 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 MTPNP58546 118 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 ZNF781Q8N8C0 355 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 TTPALQ9BTX7 342 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 PRAF2O60831 178 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 GHRHRQ02643 423 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 RASGEF1CQ8N431 466 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 SPPL2BQ8TCT7 592 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 FGGYQ96C11 551 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 HDHD5Q9BXW7 423 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 B3GNT2Q9NY97 397 aa18.69■□□□□ 0.58
CACNA1A-257ENST00000638009 EEF1E1O43324 174 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 TLX2O43763 284 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 NAP1L6A6NFF2 107 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 ZNF43P17038 809 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 RPL35P42766 123 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 GAS6Q14393 721 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 SLC27A4Q6P1M0 643 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 WDR55Q9H6Y2 383 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 EXTL2Q9UBQ6 330 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 NAALAD2Q9Y3Q0 740 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 FAM149AA5PLN7 773 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 RHOQP17081 205 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 UPP1Q16831 310 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 PDSS2Q86YH6 399 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 GNPDA2Q8TDQ7 276 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 BLOC1S5-TXNDC5H3BN57 136 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 PLA2G16P53816 162 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 SP3Q02447 781 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 CLVS2Q5SYC1 327 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 AGAP7PQ5VUJ5 663 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 AGAP6Q5VW22 663 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 TRAPPC6BQ86SZ2 158 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 AGAP4Q96P64 663 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 NAA11Q9BSU3 229 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 OPA3Q9H6K4 179 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 KHDC1Q4VXA5 237 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 TLDC1Q6P9B6 456 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 PIGZQ86VD9 579 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 UTS2RQ9UKP6 389 aa18.68■□□□□ 0.58
CACNA1A-257ENST00000638009 BTBD17A6NE02 478 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 NDUFAF5Q5TEU4 345 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 ASF1BQ9NVP2 202 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 OR7A17O14581 309 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 APOA2P02652 100 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 RNF4P78317 190 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 ARHGAP19Q14CB8 494 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 BCL2L15Q5TBC7 163 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 RBMXL1Q96E39 390 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 PRMT8Q9NR22 394 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 GPR137BO60478 399 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 FPR1P21462 350 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 SLC43A2Q8N370 569 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 SEMA6DQ8NFY4 1073 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 SLC7A4O43246 635 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 RNF32Q9H0A6 362 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 KLHL21Q9UJP4 597 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 KITLGP21583 273 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 NUDT6P53370 316 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 GDPD1Q8N9F7 314 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 HERVK_113Q902F9 699 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 TEX10Q9NXF1 929 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 PCDHB3Q9Y5E6 796 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 NOTCH3Q9UM47 2321 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 GJB1P08034 283 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 SLC10A1Q14973 349 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 POU2F3Q9UKI9 436 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 RFPL2O75678 378 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 C6P13671 934 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 SLC18A1P54219 525 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 ARL16Q0P5N6 197 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 NANOS1Q8WY41 292 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 PKP4Q99569 1192 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 DPYSL5Q9BPU6 564 aa18.67■□□□□ 0.58
CACNA1A-257ENST00000638009 OR1E3Q8WZA6 343 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 FAXDC2Q96IV6 333 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 OR2AG1Q9H205 316 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 EIF2B4Q9UI10 523 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 USP31Q70CQ4 1352 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 SCNN1AP37088 669 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 CNTN3Q9P232 1028 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 TIMM22Q9Y584 194 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 RNF212BA8MTL3 300 aa18.66■□□□□ 0.58
CACNA1A-257ENST00000638009 P2RX1P51575 399 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms