RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 ROGDIQ9GZN7 287 aa3.82□□□□□ -1.8
SCN1A-214ENST00000637038 TMEM245Q9H330 911 aa3.82□□□□□ -1.8
SCN1A-214ENST00000637038 MRPL17Q9NRX2 175 aaKnown RBP3.82□□□□□ -1.8
SCN1A-214ENST00000637038 FARSBQ9NSD9 589 aaKnown RBP3.82□□□□□ -1.8
SCN1A-214ENST00000637038 TRMT13Q9NUP7 481 aaKnown RBP3.82□□□□□ -1.8
SCN1A-214ENST00000637038 DLGAP4Q9Y2H0 992 aa3.82□□□□□ -1.8
SCN1A-214ENST00000637038 KLHL20Q9Y2M5 609 aa3.82□□□□□ -1.8
SCN1A-214ENST00000637038 YIPF1Q9Y548 306 aa3.82□□□□□ -1.8
SCN1A-214ENST00000637038 ASB1Q9Y576 335 aa3.82□□□□□ -1.8
SCN1A-214ENST00000637038 TRAV19A0A0A6YYK7 116 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CCDC182A6NF36 153 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GRXCR1A8MXD5 290 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TTC34A8MYJ7 566 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PCDH7O60245 1069 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 NBNO60934 754 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ADAM23O75077 832 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 OXSR1O95747 527 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ABCB1P08183 1280 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 HTR1AP08908 422 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GSTM1P09488 218 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PABPC1P11940 636 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GADD45AP24522 165 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CXCR2P25025 360 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CTGFP29279 349 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TIA1P31483 386 aaKnown RBP eCLIP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SEPHS1P49903 392 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RORCP51449 518 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RAB25P57735 213 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 OR2B6P58173 313 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PPP1R8Q12972 351 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GNA13Q14344 377 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MED22Q15528 200 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TAB1Q15750 504 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TMEM44Q2T9K0 475 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZFP69Q49AA0 526 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLC8B1Q6J4K2 584 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CXorf57Q6NSI4 855 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MZT2BQ6NZ67 158 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ERAP2Q6P179 960 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PLBD1Q6P4A8 553 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 BRAT1Q6PJG6 821 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CADM3Q8N126 398 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 C7orf57Q8NEG2 295 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 FAM46DQ8NEK8 389 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 OR52N2Q8NGI0 321 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GRPEL2Q8TAA5 225 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ASB11Q8WXH4 323 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 KLHL6Q8WZ60 621 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 POM121Q96HA1 1249 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 DEPDC7Q96QD5 511 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZNF607Q96SK3 696 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MND1Q9BWT6 205 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 BOCQ9BWV1 1114 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 FAM83DQ9H4H8 585 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 REEP4Q9H6H4 257 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZDHHC6Q9H6R6 413 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CARS2Q9HA77 564 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 C3orf14Q9HBI5 128 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ABCB8Q9NUT2 735 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MGAT4BQ9UQ53 548 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLC22A14Q9Y267 594 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GSTK1Q9Y2Q3 226 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 A0A075B6Q4 140 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 DCDC2BA2VCK2 349 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CENPBD1B2RD01 187 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 EFEMP2O95967 443 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ADAP00813 363 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 LCKP06239 509 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 GALTP07902 379 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZNF16P17020 682 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RHCEP18577 417 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 AOAHP28039 575 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 POU1F1P28069 291 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLC6A12P48065 614 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SELENOWP63302 87 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 CDK6Q00534 326 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZNF763Q0D2J5 394 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 NAE1Q13564 534 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 STARD3Q14849 445 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 UBXN2BQ14CS0 331 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 RGNQ15493 299 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 MICAQ29983 383 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLX4IPQ5VYV7 408 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 LRRC66Q68CR7 880 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 PRSS55Q6UWB4 352 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 IKBIPQ70UQ0 350 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 C1orf52Q8N6N3 182 aaKnown RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 TMEM105Q8N8V8 129 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SCRN2Q96FV2 425 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 APIPQ96GX9 242 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 HHIPQ96QV1 700 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLC35A5Q9BS91 424 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ZSCAN5AQ9BUG6 496 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 EDEM2Q9BV94 578 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SLC22A4Q9H015 551 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 IKZF5Q9H5V7 419 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 POLMQ9NP87 494 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-214ENST00000637038 SERHLQ9NQF3 203 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 ITM2CQ9NQX7 267 aa3.81□□□□□ -1.8
SCN1A-214ENST00000637038 DIABLOQ9NR28 239 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms