RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 APRTP07741 180 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 CCND1P24385 295 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 STIP1P31948 543 aaKnown RBP16.65■□□□□ 0.26
CLN6-212ENST00000636020 SCTRP47872 440 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 HNRNPFP52597 415 aaKnown RBP16.65■□□□□ 0.26
CLN6-212ENST00000636020 KCNJ2P63252 427 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 KLF1Q13351 362 aaPredicted RBP16.65■□□□□ 0.26
CLN6-212ENST00000636020 TNK1Q13470 666 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 PHKG1Q16816 387 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 MBOAT1Q6ZNC8 495 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 CENPUQ71F23 418 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 PIWIL4Q7Z3Z4 852 aaKnown RBP16.65■□□□□ 0.26
CLN6-212ENST00000636020 TBC1D19Q8N5T2 526 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 TMEM52Q8NDY8 209 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 PAQR8Q8TEZ7 354 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 PTPMT1Q8WUK0 201 aaPredicted RBP16.65■□□□□ 0.26
CLN6-212ENST00000636020 MFSD3Q96ES6 412 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 TRIB1Q96RU8 372 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 HAUS8Q9BT25 410 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 RAB6BQ9NRW1 208 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 PDE10AQ9Y233 779 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 DHRS7Q9Y394 339 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 SOX30O94993 753 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 TMIGD3P0DMS9 266 aaPredicted RBP16.64■□□□□ 0.25
CLN6-212ENST00000636020 PAX1P15863 534 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 OGNP20774 298 aaKnown RBP16.64■□□□□ 0.25
CLN6-212ENST00000636020 AHRP35869 848 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 SLC13A2Q13183 592 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 PIGGQ5H8A4 983 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 PRAMEF20Q5VT98 475 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 CES3Q6UWW8 571 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 SYDE1Q6ZW31 735 aaPredicted RBP16.64■□□□□ 0.25
CLN6-212ENST00000636020 LUZP2Q86TE4 346 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLN6-212ENST00000636020 TC2NQ8N9U0 490 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 IGFBPL1Q8WX77 278 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 DAZLQ92904 295 aaKnown RBP16.64■□□□□ 0.25
CLN6-212ENST00000636020 IL22Q9GZX6 179 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 AICDAQ9GZX7 198 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 SPNS1Q9H2V7 528 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 CALHM2Q9HA72 323 aa16.64■□□□□ 0.25
CLN6-212ENST00000636020 RAI1Q7Z5J4 1906 aaPredicted RBP16.64■□□□□ 0.25
CLN6-212ENST00000636020 CPA2P48052 419 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 CCZ1BP86790 482 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 CCZ1P86791 482 aaPredicted RBP16.63■□□□□ 0.25
CLN6-212ENST00000636020 TBL3Q12788 808 aaKnown RBP16.63■□□□□ 0.25
CLN6-212ENST00000636020 FOXF2Q12947 444 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 RUNX2Q13950 521 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 MPEG1Q2M385 716 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 VASNQ6EMK4 673 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 CILP2Q8IUL8 1156 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 MEIOBQ8N635 442 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 ANKRD53Q8N9V6 530 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 C9orf106Q8NAJ2 232 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 MAPK1IP1LQ8NDC0 245 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 OR5L2Q8NGL0 311 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 SNF8Q96H20 258 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 KIFC1Q9BW19 673 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 OR8D2Q9GZM6 311 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 ADAMTS6Q9UKP5 1117 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 CAMK2AQ9UQM7 478 aa16.63■□□□□ 0.25
CLN6-212ENST00000636020 HEATR5AQ86XA9 2040 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 A0A087X1B8 175 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 TCRBV7S2A1N4TA0A589 114 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 TLX2O43763 284 aaPredicted RBP16.62■□□□□ 0.25
CLN6-212ENST00000636020 NRDCO43847 1150 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 C1QAP02745 245 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 IFNA16P05015 189 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 PTMAP06454 111 aaKnown RBP16.62■□□□□ 0.25
CLN6-212ENST00000636020 NPY2RP49146 381 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 BTN3A2P78410 334 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 KRTAP24-1Q3LI83 254 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 C10orf62Q5T681 223 aaPredicted RBP16.62■□□□□ 0.25
CLN6-212ENST00000636020 CAVIN1Q6NZI2 390 aaKnown RBP16.62■□□□□ 0.25
CLN6-212ENST00000636020 ZNF549Q6P9A3 640 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 LYPD8Q6UX82 237 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 CLNKQ7Z7G1 428 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 CPNE9Q8IYJ1 553 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 TRPV3Q8NET8 790 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 OR14A16Q8NHC5 309 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 KCNJ9Q92806 393 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 PIK3IP1Q96FE7 263 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 WDYHV1Q96HA8 205 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 OR4K3Q96R72 315 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 ZNF701Q9NV72 531 aaPredicted RBP16.62■□□□□ 0.25
CLN6-212ENST00000636020 INTS10Q9NVR2 710 aaKnown RBP16.62■□□□□ 0.25
CLN6-212ENST00000636020 VTI1BQ9UEU0 232 aa16.62■□□□□ 0.25
CLN6-212ENST00000636020 MYOCOSA0A1B0GUC4 107 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 SYNDIG1LA6NDD5 238 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 MFAP3LO75121 409 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 IFNB1P01574 187 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 ETS1P14921 441 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 GDF1P27539 372 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 RPL22P35268 128 aaKnown RBP16.61■□□□□ 0.25
CLN6-212ENST00000636020 MC3RP41968 323 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 NR1H2P55055 460 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 RAB38P57729 211 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 ASPHQ12797 758 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 TOR1AIP1Q5JTV8 583 aa16.61■□□□□ 0.25
CLN6-212ENST00000636020 PRUNE1Q86TP1 453 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms