RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MYNNQ9NPC7 610 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 HPS4Q9NQG7 708 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM30AQ9NV96 361 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ADPRHL2Q9NX46 363 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 COQ3Q9NZJ6 369 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 NPAP1Q9NZP6 1156 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TUBGCP4Q9UGJ1 667 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 FBXL5Q9UKA1 691 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PADI2Q9Y2J8 665 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 KCNK7Q9Y2U2 307 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 AMDHD2Q9Y303 409 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 NFS1Q9Y697 457 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ACACAQ13085 2346 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 COL27A1Q8IZC6 1860 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 NAV2Q8IVL1 2488 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CEP192Q8TEP8 1941 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PLXNB3Q9ULL4 1909 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ATG2BQ96BY7 2078 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PCNX2A6NKB5 2137 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PI4KAP42356 2102 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SDK1Q7Z5N4 2213 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CELSR2Q9HCU4 2923 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LRRK2Q5S007 2527 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TLN1Q9Y490 2541 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 COL5A1P20908 1838 aaPredicted RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 PIEZO2Q9H5I5 2752 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 A0A087WWV3 80 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LRRD1A4D1F6 860 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 MTMR11A4FU01 709 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CLEC18AA5D8T8 446 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 OR5K3A6NET4 321 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 NEMP2A6NFY4 417 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 C5orf52A6NGY3 159 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LRRIQ4A6NIV6 560 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 SPECC1L-ADORA2AF8WAN1 911 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF263O14978 683 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 MID1O15344 667 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 EXTL3O43909 919 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 JAK2O60674 1132 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 KCNJ13O60928 360 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TOM1L1O75674 476 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 B3GAT3O94766 335 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 REC8O95072 547 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 BMP10O95393 424 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 MOCS3O95396 460 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CLDN14O95500 239 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 IGHV2-70P01814 119 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 PROS1P07225 676 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF806P0C7X5 589 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 PLA2G4BP0C869 781 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CXCL8P10145 99 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 SAGP10523 405 aaPredicted RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 MCF2P10911 925 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 HMGA1P17096 107 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 GNAZP19086 355 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TYMPP19971 482 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CD22P20273 847 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 ACAT1P24752 427 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 MPZP25189 248 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 U2AF2P26368 475 aaKnown RBP eCLIP2.31□□□□□ -2.043e-8■□□□□ 9.3
SMARCB1-208ENST00000634926 PSMA5P28066 241 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 GDI1P31150 447 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TIA1P31483 386 aaKnown RBP eCLIP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 RPL9P32969 192 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CA8P35219 290 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 PRPHP41219 470 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LHX1P48742 406 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 BRWD1-AS2P59051 145 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 COG7P83436 770 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 BNC1Q01954 994 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 AKAP17AQ02040 695 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 UBXN1Q04323 297 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CSTF1Q05048 431 aaKnown RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 RUNX1T1Q06455 604 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TWF1Q12792 350 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 PNRC1Q12796 327 aaPredicted RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 PLA2G7Q13093 441 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 GPR17Q13304 367 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF234Q14588 700 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF77Q15935 545 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 IL17AQ16552 155 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CALCRLQ16602 461 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 C2orf76Q3KRA6 126 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM174BQ3ZCQ3 159 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM35AQ53FP2 167 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 SETMARQ53H47 684 aaPredicted RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 GRTP1Q5TC63 336 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 CENPPQ6IPU0 288 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 MFSD12Q6NUT3 480 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 SLC39A4Q6P5W5 647 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LINGO4Q6UY18 593 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 C1orf186Q6ZWK4 172 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TMPRSS11FQ6ZWK6 438 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 HOOK3Q86VS8 718 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 LONP2Q86WA8 852 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 RALGPS2Q86X27 583 aaPredicted RBP2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 ZBTB8OSQ8IWT0 167 aa2.31□□□□□ -2.04
SMARCB1-208ENST00000634926 TUSC5Q8IXB3 177 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms