RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 IMPG1Q17R60 797 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 SPDYAQ5MJ70 313 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 OVCH1Q7RTY7 1134 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 PTRH1Q86Y79 214 aaKnown RBP17.58■□□□□ 0.41
PNKP-224ENST00000631020 KIRREL3Q8IZU9 778 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 C19orf60Q96EN9 201 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 SERINC2Q96SA4 455 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 NUF2Q9BZD4 464 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 HCN3Q9P1Z3 774 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 CTSFQ9UBX1 484 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 GIMAP2Q9UG22 337 aa17.58■□□□□ 0.41
PNKP-224ENST00000631020 A0A0A6YYD5 115 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 LSM1O15116 133 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 HDAC3O15379 428 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 RGS14O43566 566 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 TMPRSS11DO60235 418 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 EDF1O60869 148 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 RSL1D1O76021 490 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 KLK1P06870 262 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 PRPH2P23942 346 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 TPP2P29144 1249 aaPredicted RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 TSFMP43897 325 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 FOXL2P58012 376 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 RAE1P78406 368 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 KLRB1Q12918 225 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 NIPAL1Q6NVV3 410 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 OR51Q1Q8NH59 317 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 ROGDIQ9GZN7 287 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 AHSPQ9NZD4 102 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 KCMF1Q9P0J7 381 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 IFT80Q9P2H3 777 aaPredicted RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 TRPC4Q9UBN4 977 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 TP53TG5Q9Y2B4 290 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 MAP4K5Q9Y4K4 846 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 PCDHGA9Q9Y5G4 932 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 B3GALT2O43825 422 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 TLE1Q04724 770 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 SLAMF1Q13291 335 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 VWA2Q5GFL6 755 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 VWA5B1Q5TIE3 1220 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 MLIPQ5VWP3 458 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 MRPL14Q6P1L8 145 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 CA13Q8N1Q1 262 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 ZCCHC7Q8N3Z6 543 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 CCT7Q99832 543 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 MAPKAP1Q9BPZ7 522 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 NPLQ9BXD5 320 aaPredicted RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 COPS7BQ9H9Q2 264 aaPredicted RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 MEAF6Q9HAF1 191 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 CLK4Q9HAZ1 481 aaKnown RBP17.57■□□□□ 0.4
PNKP-224ENST00000631020 LRTM1Q9HBL6 345 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 C1orf109Q9NX04 203 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 SIRT5Q9NXA8 310 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 VTI1BQ9UEU0 232 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 MED13Q9UHV7 2174 aa17.57■□□□□ 0.4
PNKP-224ENST00000631020 IGLV3-12A0A075B6K2 115 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 A0A088AWK7 358 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 FAM227AF5H4B4 570 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 SLCO1B7G3V0H7 640 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 PEX11AO75192 247 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 SEC22BO75396 215 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 PIM1P11309 404 aaPredicted RBP17.56■□□□□ 0.4
PNKP-224ENST00000631020 ZNF10P21506 573 aaPredicted RBP17.56■□□□□ 0.4
PNKP-224ENST00000631020 HK2P52789 917 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 LIM2P55344 173 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 SKP1P63208 163 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 ACSM2AQ08AH3 577 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 NR6A1Q15406 480 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 RFTN2Q52LD8 501 aaPredicted RBP17.56■□□□□ 0.4
PNKP-224ENST00000631020 FAM69BQ5VUD6 431 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 ACSM2BQ68CK6 577 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 MRM1Q6IN84 353 aaKnown RBP17.56■□□□□ 0.4
PNKP-224ENST00000631020 GALNT18Q6P9A2 607 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 NUDT13Q86X67 352 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 PEX11GQ96HA9 241 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 IP6K3Q96PC2 410 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 ZNF317Q96PQ6 595 aaPredicted RBP17.56■□□□□ 0.4
PNKP-224ENST00000631020 YIPF2Q9BWQ6 316 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 ING2Q9H160 280 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 EPN3Q9H201 632 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 SLC26A1Q9H2B4 701 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 ADAM29Q9UKF5 820 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 DAPP1Q9UN19 280 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 PCDHGB7Q9Y5F8 929 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 USH1CQ9Y6N9 552 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 CCDC88CQ9P219 2028 aa17.56■□□□□ 0.4
PNKP-224ENST00000631020 SETXQ7Z333 2677 aaKnown RBP17.55■□□□□ 0.4
PNKP-224ENST00000631020 VSTM2BA6NLU5 285 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 SDHDO14521 159 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 JRKO75564 520 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 KLF7O75840 302 aaPredicted RBP17.55■□□□□ 0.4
PNKP-224ENST00000631020 ALBP02768 609 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 NKG7Q16617 165 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 SPIN4Q56A73 249 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 C6orf136Q5SQH8 315 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 CCNYL2Q5T2Q4 361 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 RIPOR1Q6ZS17 1223 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 ASB18Q6ZVZ8 466 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 MED25Q71SY5 747 aa17.55■□□□□ 0.4
PNKP-224ENST00000631020 LAPTM4BQ86VI4 370 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms