RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TBX6O95947 436 aaPredicted RBP17.58■□□□□ 0.4
SMN2-215ENST00000628696 HOXD4P09016 255 aaPredicted RBP17.58■□□□□ 0.4
SMN2-215ENST00000628696 CNR1P21554 472 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 ART1P52961 327 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 SLC12A2P55011 1212 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 TGM3Q08188 693 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 FRG1Q14331 258 aaKnown RBP17.58■□□□□ 0.4
SMN2-215ENST00000628696 EFTUD2Q15029 972 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMN2-215ENST00000628696 TGFBIQ15582 683 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 ADPRMQ3LIE5 342 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 NDUFAF5Q5TEU4 345 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 RTL4Q6ZR62 310 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 FAM47EQ6ZV65 393 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 VN1R5Q7Z5H4 357 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 SPATA6LQ8N4H0 392 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 FBXO36Q8NEA4 188 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 OR14A16Q8NHC5 309 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 ESAMQ96AP7 390 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 F2RL3Q96RI0 385 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 FAM173AQ9BQD7 235 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 PITHD1Q9GZP4 211 aaPredicted RBP17.58■□□□□ 0.4
SMN2-215ENST00000628696 GPRC5BQ9NZH0 403 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 VTI1BQ9UEU0 232 aa17.58■□□□□ 0.4
SMN2-215ENST00000628696 ZNF490Q9ULM2 529 aaPredicted RBP17.58■□□□□ 0.4
SMN2-215ENST00000628696 ATP6AP2A0A1C7CYW4 349 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 SYNDIG1LA6NDD5 238 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 FIGNL2A6NMB9 653 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 BCKDKO14874 412 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 LDB3O75112 727 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 ATP6AP2O75787 350 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 KRT38O76015 456 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 ZWINTO95229 277 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 CD1EP15812 388 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 MAGEA5P43359 124 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 HSPA7P48741 367 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 ID2Q02363 134 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 PDIA2Q13087 525 aaKnown RBP17.57■□□□□ 0.4
SMN2-215ENST00000628696 GPSM1Q86YR5 675 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 CLYBLQ8N0X4 340 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 TMEM251Q8N6I4 163 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 KIAA1191Q96A73 305 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 TMEM79Q9BSE2 394 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 TRIM31Q9BZY9 425 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 RHOJQ9H4E5 214 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 LDAHQ9H6V9 325 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 CNOT10Q9H9A5 744 aaKnown RBP17.57■□□□□ 0.4
SMN2-215ENST00000628696 IL1RL2Q9HB29 575 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 PRDM7Q9NQW5 492 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 ALKBH4Q9NXW9 302 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 KCNN3Q9UGI6 736 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 ACAD8Q9UKU7 415 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 MTORP42345 2549 aa17.57■□□□□ 0.4
SMN2-215ENST00000628696 ZFHX3Q15911 3703 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 OR14I1A6ND48 311 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 PRAMEF4O60810 478 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 DIAPH2O60879 1101 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 PIAS1O75925 651 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 GLSO94925 669 aaPredicted RBP17.56■□□□□ 0.4
SMN2-215ENST00000628696 P04436 131 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 GLI4P10075 376 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 DNASE1L1P49184 302 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 RNF4P78317 190 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 DR1Q01658 176 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 DOC2AQ14183 400 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 FASTKD3Q14CZ7 662 aaKnown RBP17.56■□□□□ 0.4
SMN2-215ENST00000628696 PRAMEF9Q5VWM5 478 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 B3GNT6Q6ZMB0 384 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 CAPN12Q6ZSI9 719 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 SYDE1Q6ZW31 735 aaPredicted RBP17.56■□□□□ 0.4
SMN2-215ENST00000628696 TRILQ7L0X0 811 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 TCAIMQ8N3R3 496 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 FAM109AQ8N4B1 249 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 OR5L2Q8NGL0 311 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 SLC2A12Q8TD20 617 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 NRGNQ92686 78 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 PTCD3Q96EY7 689 aaKnown RBP17.56■□□□□ 0.4
SMN2-215ENST00000628696 SGCZQ96LD1 299 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 RUNDC3BQ96NL0 473 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 MAPKAP1Q9BPZ7 522 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 TTYH2Q9BSA4 534 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 DERL2Q9GZP9 239 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 EXO5Q9H790 373 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 CAB39LQ9H9S4 337 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 SACM1LQ9NTJ5 587 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 MOCS1Q9NZB8 636 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 NINQ8N4C6 2090 aa17.56■□□□□ 0.4
SMN2-215ENST00000628696 KLK8O60259 260 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 ZNF354AO60765 605 aaPredicted RBP17.55■□□□□ 0.4
SMN2-215ENST00000628696 SH3BGRLO75368 114 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 STK16O75716 305 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 IGHG3P01860 377 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 CELA3AP09093 270 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 ZFP36L2P47974 494 aaKnown RBP17.55■□□□□ 0.4
SMN2-215ENST00000628696 KCNC1P48547 511 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 MAN2A2P49641 1150 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 SERTAD2Q14140 314 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 SLC10A1Q14973 349 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 HIST2H2ACQ16777 129 aaPredicted RBP17.55■□□□□ 0.4
SMN2-215ENST00000628696 HIST2H2AA3Q6FI13 130 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms